KEGG C.elegans: D2089.5

Caenorhabditis elegans (nematode): D2089.5

Entry

D2089.5 CDS C.elegans

Gene name gbh-1

Definition Gamma Butyrobetaine Hydroxylase

Orthology K00471 gamma-butyrobetaine dioxygenase [EC:1.14.11.1]

Pathway cel00310 Lysine degradation

Class Metabolism; Amino Acid Metabolism; Lysine degradation
[PATH:cel00310]

SSDB

Motif Pfam: TauD DUF971

Other DBs NCBI-GI: 17534641
NCBI-GeneID: 174648
WormBase: WBGene00001522
UniProt: Q19000

Position II

AA seq 421 aa
MLSALLIRNIRNASKLASVAGPNSDRIVNVKWSDGKTGVFPLIWLRDTSPDPSTYTISPA
MTARKLTMLEFDVEQNARKLWIDEDANCLKIEWESGVLSEFPSEWLKIRNPSDQEARRRR
RKVYLFPEQTWGKAEIEGKLKKFSHEEFMKNEQVVHDFLQAVCIDGIAVLKGAPQGVRGA
VEAIGDRIGMIKRTHFGLVFEVSLKADASNMAYASNGGLPFHTDFPSLSHPPQLQMLHML
QSAEEGGHSLFVDGFHVAEQLRVEKPEIFKILTTQSMEYIEEGYDVHEINGKTIRFDYDM
CARHKVIRLNDDGKVNKIQFGNAMRSWFYDCEPSKVQDVYRAMKTFTEYCYQPRNMLKFR
LEDGDTVLWANQRLLHTRDGFRNAPEKARTLTGCYFDWDIVKSRVRFLRDKLSLEQNQPS
A

NT seq 1266 nt +upstreamnt +downstreamnt
atgctgtctgcccttttaattagaaatattcgaaacgctagcaaattggcatcggtcgct
ggtccaaactctgatagaattgtgaatgtaaaatggagtgatggaaaaactggtgtattc
ccgttaatctggttgcgggacacatctccagatccatcaacctacacaattagccccgca
atgactgctcgtaagctgacaatgttagagttcgacgtggaacaaaacgctagaaaatta
tggattgatgaggatgcaaactgtttaaaaattgaatgggaatccggagttttgagtgaa
ttcccgtcggaatggctgaaaatccgaaacccatcagatcaagaagcacgtcgtcgaagg
aggaaggtctacttgtttccggaacaaacgtggggaaaagcggaaattgagggaaaactg
aaaaagttcagtcatgaagagtttatgaagaatgagcaggtagttcatgacttcctgcaa
gcagtttgtatcgatggaattgccgttttgaaaggagctccacaaggtgtcagaggggct
gttgaagcaattggagatagaattggaatgattaaaaggacgcattttgggttagttttc
gaagtgagcttgaaagcagacgcctctaacatggcttatgcttcaaatgggggactacca
tttcacacggattttccgtctttgtcacaccctccacagctccaaatgctccatatgcta
caaagtgcggaagaaggaggacatagtctatttgttgatggatttcatgtcgcagagcag
ctccgagttgaaaagccagagatcttcaaaatcttgaccactcaatccatggaatacatt
gaagaaggatatgatgttcatgagattaatggaaaaactatacgctttgattatgacatg
tgtgcaaggcacaaggttattcggctgaatgatgacggaaaagtcaataagatacagttc
ggaaacgccatgcgcagttggttctacgattgtgagccaagcaaggttcaggatgtttat
agagcaatgaaaacattcaccgaatactgctatcaaccacgcaatatgctgaaattccgg
cttgaagacggtgacaccgttttatgggctaatcaacgattattacacactcgagatgga
ttccgaaatgccccagaaaaggccagaacactgacgggttgctatttcgattgggatatt
gtaaagtcacgagttcgatttttaagagataaactatcactggagcagaatcaaccttct
gcttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UNIGENE (1)   
   WORMBASE-CEL (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)

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