KEGG T03328: LH23

Cedecea neteri M006: LH23_04960

Entry

LH23_04960        CDS       T03328

Name

(GenBank) hypothetical protein

K01879

glycyl-tRNA synthetase beta chain [EC:6.1.1.14]

Organism

cem Cedecea neteri M006

Pathway

cem00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:cem00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    LH23_04960
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cem01007]
    LH23_04960
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cem03016]
    LH23_04960
Enzymes [BR:cem01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     LH23_04960
Amino acid related enzymes [BR:cem01007]
Aminoacyl-tRNA synthetase
  Class II (C/G)
   LH23_04960
Transfer RNA biogenesis [BR:cem03016]
Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    LH23_04960

SSDB

Motif

Pfam:

tRNA_synt_2f DALR_1

Other DBs

NCBI-ProteinID:

AIR60029

Position

complement(1039529..1041598)

AA seq 689 aa
MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDAANIAHGEVKWFAAPRRLALKIAN
LAASQPDREVEKRGPAVSAAFDAEGKPSKAAEGWARGCGITVDQAERLATDKGEWLMYRA
HVKGESVQALLPNMIATSLAKLPIPKLMRWGASDIQFVRPIHTVTLLLGDELIPATILGI
QSARVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAAIKRDAEEAARKIGGQ
ADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAADGKLLPN
FIFVANIESKDPVQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLETVLFQKELGT
LRDKTNRIEALSGWIAGQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD
GEAEDVAVALNEQYQPRFAGDALPSNLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFAL
RRAALGVLRIIVEKNLPLDLQTLTEEAVRLYGSKLTNTNVVDEVIDFMLGRFRTWYQEEG
HAVDTIQAVLARRPTKPADFDARMKAVSHFRTLEAAASLAAANKRVSNILAKSDEVLNDT
VQATVLKEAEEIRLATNVVVLRDKLQPYFAEGRYQEALEELANLREPVDEFFDKVMVNAE
DKDLRINRLTLLTKLRELFLQVADISLLQ

NT seq 2070 nt +upstreamnt +downstreamnt
atgtctgaaaaaacttttctggtggagatcggcactgaagagctgccaccaaaagccttg
cgcagcctggctgagtccttcgctgccaacgttaccgccgagctggatgcagccaacatc
gcgcacggcgaagtaaaatggtttgctgccccgcgtcgcctggcgctgaaaatcgctaat
ctggcggcttcacagccggatcgcgaagttgaaaaacgcggccctgcggtgtctgctgcg
ttcgacgctgaaggcaaaccaagcaaagccgctgaaggctgggctcgtggctgcgggatc
accgttgaccaggccgagcgtctggctaccgacaaaggcgagtggctgatgtaccgcgcc
cacgtgaagggcgaaagcgtgcaggctctgctgccaaacatgattgccacttctctggcg
aagctgccgattcctaaactgatgcgctggggcgcgtccgatatccagttcgtgcgcccg
attcataccgtgacgctgctgctgggtgacgaactgattcctgccactattctgggcatt
cagtccgctcgcgtgatccgcggccaccgctttatgggcgagccggagttcaccatcgac
aatgccgaccagtatccgcagatcctgctggagcgcgggaaagtcattgctgattacgaa
gcgcgtaaagccgccatcaaacgtgatgccgaagaagctgcccgtaaaatcggcggtcag
gctgacctgagcgaaagcctgctggaagaagttacctcgctggtggaatggccagtggtg
ctgaccgcgaagttcgaagagaaattcctggccgtgcctgccgaagcgctggtttacacc
atgaagggtgaccagaagtacttcccggtctacgcggccgacggcaaactgctgccgaac
ttcatcttcgtggcgaacatcgagtccaaagacccggtgcagatcatctccggtaacgag
aaggtggttcgcccgcgcctcgcagatgccgagttcttcttcaataccgaccgtaaaaag
cgcctggaagacaacctgccgcgtctggaaacagttctgttccagaaagagctgggtacc
ctgcgcgacaaaaccaaccgtatcgaagcgctttccggctggattgcgggccagattggc
gccgacgtgaatcacgcgacccgcgctggcctgctgtctaagtgcgacctgatgaccaac
atggtgttcgagtttaccgacacccagggcgtgatgggcatgcactacgcgcgccacgac
ggcgaagcggaagacgttgcggttgcgctgaacgagcagtaccagccacgctttgcgggt
gatgccctgccgtctaacctggtggcctgtgccgtggcgattgccgataagatggacacc
ctcgcgggcatctttggcattggccagcatccgaaaggcgataaagacccgttcgcgctg
cgccgcgccgcgctgggcgtgttgcgtattatcgttgagaaaaacctgccgctggacctg
caaactctgaccgaagaagcggttcgcctctacggcagcaagctgaccaacaccaacgtg
gtagatgaagttatcgacttcatgctgggtcgcttccgcacctggtatcaggaagaaggc
cacgcggttgacaccatccaggctgttctggcgcgtcgtcctaccaaaccggctgacttc
gatgctcgcatgaaggcggtttcccacttccgtactctggaagcggcggcatctctggcg
gcggctaacaagcgtgtttccaacattcttgccaagtctgacgaagtgctgaacgacacc
gtgcaggccaccgtgctgaaagaagccgaagaaattcgtctggcgaccaacgtcgtcgtg
ctgcgcgataaactgcagccgtacttcgccgaaggccgttaccaggaagctctggaagag
ctggccaacctgcgcgagccggtggatgagttcttcgacaaggtgatggtaaacgcggaa
gataaagatctgcgtattaaccgcctgacgctgctgactaagctgcgcgagctgttcctg
caggtggcagacatctctctgctgcagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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