KEGG   Cyanobacterium endosymbiont of Epithemia turgida: ETSB_0434
Entry
ETSB_0434         CDS       T03622                                 
Symbol
recJ1
Name
(GenBank) ssDNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ceo  Cyanobacterium endosymbiont of Epithemia turgida
Pathway
ceo03410  Base excision repair
ceo03430  Mismatch repair
ceo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ceo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ETSB_0434 (recJ1)
   03430 Mismatch repair
    ETSB_0434 (recJ1)
   03440 Homologous recombination
    ETSB_0434 (recJ1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ceo03400]
    ETSB_0434 (recJ1)
DNA repair and recombination proteins [BR:ceo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     ETSB_0434 (recJ1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     ETSB_0434 (recJ1)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ETSB_0434 (recJ1)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 Toprim DUF4434
Other DBs
NCBI-ProteinID: BAP17291
UniProt: A0A077JEK9
Position
691347..693317
AA seq 656 aa
MKLPDQRWQVAVPNPKQVEQLIKTTKLPPLIAQVIINRGIESSNAIEIYLSPETQTLPSP
LEEFPDLEISVKLLKDAITTEKKIVICGDYDADGMTSTALLLRALTHLGADVHYKIPNRI
KDGYGINEHIVEACANEGVGLILTVDNGITACKPIQRAIELGLSVIITDHHNLPKKLPPA
DAILNPKLLRETSPYCGLAGVGVAYILAVTIAQSFGLLKGLVNPLLELFTLGTIADLVPL
VGVNRRWLKRGLRKLPHSKLAGVQALMQVTGISEEQKQLKPDDIGFRLGPRINAVGRIGE
PQIAIELLTTDDPKIALERAMQCEQINNKRKSICEKIELEAIHLIENTPILWKRDRVLVV
IKSQWHHGVIGIVASRLVERYGVPVFIGTYEENSSKIRGSARGIKEFNIVEGLDFCQDIL
EKYGGHKAAGGFSLSASKLEAFKQRLSTFAHQCLKTQHLKPLVIIDAQANFKELTTNLYQ
SIDQLQPLGIGNPFPVFWTPNIYIVKQRIVGKNHIKLEISQNDYNQTEIYAIAWRWGEYF
PLPKRVDIAYKLTENDWNGNSKIELDIVGIRLPSYPLSASDQKSEIFQYQGRNYRCSFSA
TEKKLKIRNDQGKVLAVKRGERQGFLGTTRENLQNVDITQQRYFDLIKIAMEVLGL
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgaaattgcccgatcaacgatggcaagttgctgttcctaatcccaaacaagtcgagcaa
ctgatcaaaacaacaaaactaccacctttaattgcccaagttattattaatcggggtatt
gagagttccaatgctattgaaatctacctcagtcctgaaactcaaactcttccttcacct
ttagaggaattccctgatttagagatcagtgtaaaattattaaaagatgcgattaccaca
gagaaaaaaatcgttatttgtggggactatgatgctgatggtatgactagtactgcctta
ttattgcgtgctctcacccacttgggggctgatgttcactataaaattcccaatcggata
aaagatggttatggcattaatgaacatattgtagaagcctgtgctaatgaaggagtaggg
ttgattttaacagttgacaatggcattacagcttgtaaaccgattcaacgagctatagaa
ttggggttaagtgttattatcactgatcatcataatctccctaaaaaattacctccagcc
gatgcgattcttaatccaaaattacttcgagaaacttctccttattgtggattagcagga
gtcggagtagcatatattttggcagtaacaatagctcaaagttttgggttactcaagggt
ttagtaaatccattattagaattattcacattaggaactatagcagatctagtccccctt
gttggtgtaaaccgacgttggttaaaacggggtttaaggaagcttccccactcaaaatta
gcaggagttcaagcgctcatgcaggttaccggaatcagtgaagaacaaaaacaacttaaa
cccgatgatattggctttcgattaggaccaagaattaacgcagtaggacgtattggcgag
cctcaaatagcgattgaattattgactactgatgatcctaaaatcgcattagaaagagcg
atgcaatgtgagcaaattaacaacaaacgtaagtccatatgtgaaaaaattgaattagaa
gctattcatttaatagaaaatactccaatcctttggaaacgtgaccgagttttagtggtg
atcaaatctcaatggcatcatggggttattggcattgtagcttcccgtttagtagaacgt
tacggagttcctgtttttatcggaacctatgaagaaaactctagtaaaattagagggtct
gcacgaggaattaaagagtttaatatagttgaaggattggatttttgtcaagatatttta
gaaaaatatggaggacataaagcagcaggtggcttcagtttatcagctagcaaattagag
gctttcaaacaaagattaagcaccttcgcccatcaatgcttaaaaactcaacatctcaaa
cctttagtaataattgatgctcaggctaattttaaagaattaactactaatttatatcag
tccattgatcaacttcaacctttgggaattggcaatcctttccctgttttttggactcct
aatatttatattgttaagcaaagaatagtaggtaaaaatcatattaagttagaaatttct
caaaatgattataatcaaacagagatatatgcaattgcttggcgttggggcgagtatttt
cccttacctaaacgagttgatattgcttataaactaacagaaaatgactggaatggtaat
tcaaaaattgagttagacattgtaggaatacgattaccatcatatcctttgtctgcttct
gatcagaaatcagaaatctttcaatatcaagggcgaaactatcgatgtagtttttctgcc
acggagaagaaattaaaaattagaaatgatcaaggaaaggtgttagccgttaaaagagga
gaaagacaagggtttttaggaacaacgcgggaaaatttgcagaacgtcgatattactcag
caacgttactttgatttaattaaaatagccatggaggttttaggtttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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