KEGG   Clostridium estertheticum: A7L45_13040
Entry
A7L45_13040       CDS       T04811                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
ceu  Clostridium estertheticum
Brite
KEGG Orthology (KO) [BR:ceu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ceu03032]
    A7L45_13040
   03400 DNA repair and recombination proteins [BR:ceu03400]
    A7L45_13040
Enzymes [BR:ceu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     A7L45_13040
DNA replication proteins [BR:ceu03032]
 Prokaryotic type
  DNA Topoisomerases
   A7L45_13040
DNA repair and recombination proteins [BR:ceu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      A7L45_13040
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Zn_ribbon_recom Toprim_4 Toprim_2
Other DBs
NCBI-ProteinID: APC40929
UniProt: A0A1J0GHU5
Position
complement(2887381..2889486)
AA seq 701 aa
MGQKLVIVESPAKAKTIKKYLGSSYVVEASMGHVRDLPKSQLGVDIDNNYEPKYITIRGK
GELLSKLRKAAKKSDKIYLATDPDREGEAIAWHLAKALKIDEKDKCRIEFNEITKTAVKN
AIKSPRVINAPLVDAQQARRILDRLVGYEISPILWRKVKWGLSAGRVQSVTLKIICDRQK
EIEKFITKEYWTIECELYKEGDPEKLSVKLNSKCGEKFEINSKEESEKVINNLSEKEFVV
SKIKKSSKIKNPLPPFITSTLQQDGYRKLNFATKRTMSIAQQLYEGMEIEGHGTVGLITY
MRTDSTRIADEAQQSAKDFICSKYGEKYYPSTPRIFKSKKNIQDGHEAIRPSNIEITPEI
AKKTLKAPQYKLYTLIWNRFVASQMETCLLDTVSIDIVNGDYSLKASGSKVAFDGFRKIY
GEDLEDEENNLKFPELNKEDILYSKKTEGKQHFTLPPAKFSEASLVKTLEENGIGRPSTY
APIISTLLNRKYVEKDNKALEVTEIGNIVNNILSEYFKQIVDIEFTAQMENNLDYVEEGK
EKWQNIVNNFFTPLKGDIEIAEKEIAKITIEDEVTEVECDKCGKFMVIKHGRFGDFLACP
GYPECKNTKAITKELDVPCPKCGGTILERRSKKGTKFFGCSNYPKCDFVSWHEPTDIKCS
ECGTYMVKRYSKTKSDYMECSNAECKHKEYKEEENSEEKKN
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgggacaaaaacttgttatagttgaatcacctgcaaaagctaaaaccataaagaaatat
ttaggtagtagttatgtagtagaagcgtccatgggacatgttagagatttacctaaaagc
caattgggtgttgatatcgacaacaattatgaacctaaatatataactatccgtggtaaa
ggtgaacttttatctaaactaagaaaagcagctaaaaaaagcgataaaatttatttggca
acagatcctgatagagaaggtgaagctattgcgtggcatttagcaaaagcattaaaaata
gatgaaaaagataagtgcaggatagaatttaatgagataacaaaaacggctgttaaaaac
gctataaaatctccaagagtaataaatgcaccacttgttgatgcccaacaagcaaggcgt
atacttgatagactagttggatatgagattagtcctatactttggagaaaggttaagtgg
ggactaagtgcgggaagggttcaatcagttacccttaaaataatttgtgataggcaaaaa
gaaatagaaaaatttataactaaagaatattggactatagaatgtgagttatataaagaa
ggtgaccctgagaaattaagtgttaaattaaattcaaagtgtggagaaaagtttgaaata
aattctaaggaagaaagtgaaaaggttattaataaccttagtgaaaaagaatttgttgta
agtaaaataaaaaaatcatctaaaattaagaacccactaccaccattcataacgagtaca
cttcagcaagatggttataggaaacttaactttgcaacaaaacgaactatgtctattgct
caacagttatatgaaggtatggaaatagagggacatggaacagtagggttaattacatat
atgaggaccgactccacaagaattgcagatgaggctcaacaaagtgcaaaagactttatt
tgcagcaaatatggtgaaaaatactatccaagcacaccaagaatatttaaaagtaaaaaa
aatatacaagatggtcatgaagctattagaccatctaatattgaaataacaccggaaatt
gcaaagaaaacacttaaagctccacaatacaaattatatacattgatttggaatagattc
gtagcaagtcaaatggaaacgtgtttgcttgatactgtatctatagatatagtaaatgga
gattatagtcttaaagcatctggatctaaagtagcttttgatggattcagaaaaatttat
ggtgaagatttagaagatgaagaaaataatctaaagtttccagaacttaataaggaagat
attttatatagtaaaaaaactgaaggtaaacagcatttcacattgccacctgcaaaattt
tctgaggcatctcttgtaaaaacactagaggaaaatggtatagggagacctagtacttat
gcaccaattatttctactcttcttaatagaaaatatgtggaaaaagataataaagcgtta
gaagtgacggaaatagggaatattgtaaataatatcttaagtgaatacttcaaacaaata
gtggatatagaatttacagcacaaatggaaaataatttagattatgtagaagaagggaaa
gaaaaatggcaaaacatagttaataacttttttacaccacttaaaggagatattgaaatt
gcagagaaagagatagcgaaaattacaattgaagatgaagttacagaagttgaatgtgat
aaatgtggaaagttcatggtaataaaacatggaagatttggtgattttttagcatgcccc
ggttatccggagtgtaaaaatacaaaagcaattactaaggaactagatgttccttgtcct
aaatgtggtggaacaattttagaaagaagaagtaaaaaaggaactaaatttttcggctgc
agtaactatcctaaatgtgattttgtaagttggcatgaaccaactgatataaaatgttca
gagtgtgggacatatatggttaaacgatatagtaaaacaaaaagtgattatatggaatgt
tcaaatgcagaatgtaaacataaggaatataaagaggaagaaaatagcgaagagaagaaa
aattag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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