KEGG   Canis lupus familiaris (dog): 100855710
Entry
100855710         CDS       T01007                                 
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X3
  KO
K04841  voltage-gated sodium channel type IX alpha
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    100855710 (SCN9A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cfa04040]
    100855710 (SCN9A)
Ion channels [BR:cfa04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100855710 (SCN9A)
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQ Lustrin_cystein DUF6739
Other DBs
NCBI-GeneID: 100855710
NCBI-ProteinID: XP_022270551
Ensembl: ENSCAFG00000011438
VGNC: 45924
Position
36:complement(11431905..11590849)
AA seq 1738 aa
MILTVFCLSVFALIGLQLFMGNLKHKCLRDPLDDNETLTSLLDTLEEEDYKKYFYYLEGS
KDALLCGLSTDSGQCPEGYKCVKAGRNPDYGYTSFDTFSWAFLALFRLMTQDYWENLYQQ
TLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKELEFQQMLDR
LKKEQEEAEAIAIAAAEYTSIGRSRMMGFSESSSETSKLSSKSAKERRNRRKKRNQKKLS
SGEEKGDNEKLSKSESEESIRRQSFHLGVEGHRRAREKRLSTPNQSPLSIRGSLFSGRRS
SRTSLFSFKGRGKDIGSETEFADDEHSIFGDSESRRGSLFVPHRPRERRSSNISQASRSP
PVLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTTNQIHKKRR
SSSYLLSEDMLNDPNLRQRAMSRVSILTNTVEELEESRQKCPPWWYRFAHTFLIWNCSPY
WIKFKKLVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLTVGNLVFTGIFAA
EMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINEDCTLPRWH
MNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLNLFLALLLS
SFSSDNLTAIEEDTDANNLQIAVARIKKGVNYVKQTLREFILKAFSKKPKISKDTRRAED
QNSKKENCISNRTLAEMNKDHNFHKEKEKISGFGSSMDKYLMEESDCQSFIHNPSLTVTV
PIAPGESDLENMNTEELSSDSDSEYSKGRLNRSSSSECSTVDNPLPGEGEEAEAEPVNSD
EPEACFTDGCVRRFPCCQVDIESGKGKIWWNIRKTCYRIVEHSWFESFIVLMILLSSGAL
AFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWLDFLIVDVS
LVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCL
IFWLIFSIMGVNLFAGKFYECVNTTDGSRFPTNLVQNHSDCFALMNVSQNVRWKNLKVNF
DNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVDKQPIYEYNLYMYIYFVIFIIFGSFFTL
NLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIF
DLVTNQVFDITIMVLICLNMVTMMVEKEGQSKYMTDVLYWINVVFIILFTGECVLKLISL
RHYYFTVGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKG
IRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFETFGNSMI
CLFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFL
VVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSKLSDFAAAL
DPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRSQMEERFMS
ANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLPNK
EDMVFDNIENSSPEKTDATPSTVSPPSYDSVTKPDKEKYEKDKTEKEDKGKDGKESKK
NT seq 5217 nt   +upstreamnt  +downstreamnt
atgatcttgactgtgttctgtctgagtgtgtttgcgctaattgggctacagctcttcatg
ggcaacctgaagcataaatgtctgcgggatccactggacgataatgaaacattaacaagc
ttattggatacccttgaagaagaagactataaaaaatatttttattacttagagggatct
aaggatgctctcctttgtggtttgagcacagattcaggtcagtgtccagaagggtacaag
tgtgtgaaagctgggagaaaccctgattatggctacacgagctttgacactttcagttgg
gccttcttggccttgtttcggctaatgacccaggattactgggaaaacctttaccaacag
acactgcgtgctgctgggaaaacctacatgatcttttttgttgtggtgatttttctgggc
tccttctatctaatcaacttgatccttgctgtggttgccatggcctatgaagaacagaat
caggcaaacattgaagaagcaaggcaaaaggagttagaatttcaacagatgttagatcgt
cttaaaaaagaacaagaagaagctgaggcgattgcaatagcagcagctgaatacacaagt
attgggagaagcagaatgatgggcttctctgagagttcctctgaaacatccaaactgagt
tctaaaagtgctaaagaaagaagaaacagaagaaagaaaaggaatcaaaagaagctctcc
agtggggaagaaaaaggagacaatgagaagttgtccaaatcggagtcagaggagagcatc
aggagacaaagtttccatcttggtgttgaaggtcatagacgagcacgtgagaagaggctg
tctacccctaaccagtcaccactcagcattcgaggctccttgttttctggaaggcgcagc
agcagaacaagtctttttagtttcaaaggtcgagggaaagatatcggctctgagactgaa
tttgccgacgatgagcatagcattttcggagacagtgaaagcaggaggggctcactgttt
gtgccccacagacctcgggagcggcgcagcagtaacatcagccaagccagtaggtccccc
ccggtgctgccggtgaatgggaagatgcacagtgccgtggactgcaatggtgtggtctcc
ctggttgatggaccctcagctctcatgctccccaatggacagcttctgccagaggtgata
atagataaggcaacttctgatgacagcggtacaactaatcaaatacacaagaaaagacgt
tccagttcttatctcctttccgaagacatgttgaatgatccaaatctgagacaaagagcg
atgagtagagtaagcatattaacaaacactgtagaagaacttgaagagtccagacaaaaa
tgtccaccttggtggtatagatttgcacacacattcttgatctggaattgttctccatat
tggataaaattcaaaaagcttgtctattttattgtcatggatccttttgtagatcttgct
attaccatttgcatagttttaaacacattgtttatggctatggagcatcacccaatgact
gatgaattcaaaaatgtacttactgtgggaaatttggtcttcactgggatctttgcagct
gaaatggttttaaaactaattgccatggatccatatgagtatttccaagtaggatggaac
atttttgacagccttattgtgactttaagtttagtggagctttttctagcagatgtggaa
ggactgtcagttctgcgatcattcagattgcttcgagttttcaaactagcaaagtcttgg
ccaacactgaatatgctgataaagatcatcggcaactcagtgggggctctgggcaacctc
accttggtgttggctatcatcgtcttcatttttgccgtggtcggcatgcagctctttggt
aagagctacaaagaatgtgtctgcaagatcaatgaagactgtacactcccacgctggcac
atgaatgacttcttccactctttcctaattgtcttccgtgtgctgtgtggagagtggata
gaaaccatgtgggactgtatggaggtcgctggtcaagccatgtgccttattgtgtacatg
atggtcatggtcattggaaacctagtggtcctcaacctatttctggctttattattgagc
tcatttagctcagacaatcttacagcaatcgaagaagacactgatgcaaacaacctccag
attgcagtggctagaattaagaagggagtaaattatgtgaaacaaaccttacgtgagttt
attctcaaagcattttccaaaaagccaaagatttccaaagacacaagaagagcagaagat
caaaatagtaagaaggaaaattgtatctctaaccgcacacttgctgaaatgaacaaagat
cacaatttccacaaagaaaaagagaaaatcagtggttttggaagcagcatggacaaatac
ttgatggaagaaagtgattgccaatcatttattcataatcccagcctcactgtgacagtg
ccgattgcaccgggggaatccgatttggaaaatatgaatactgaggaacttagcagtgat
tcagatagtgaatacagcaaagggagattgaaccggtcgagttcctctgagtgcagcaca
gttgataaccctctgccaggagaaggagaagaagcagaggctgaacctgtaaattcagat
gagccagaggcctgttttacagatggttgtgtgcggaggttcccatgctgccaagttgac
atagaatcagggaaaggaaaaatctggtggaacatcaggaaaacctgctacagaatagtt
gaacacagttggtttgaaagctttattgttctcatgatcctgctcagcagtggtgctctg
gcttttgaagatatatatattgaaaagaaaaagaccattaagattatcctggagtatgct
gacaagatattcacgtatattttcattctggaaatgcttctaaaatgggtagcttatggt
tataaaacgtatttcaccaatgcctggtgttggctggatttcttaattgttgatgtttct
ttggttaccttagttgcaaacactcttggctactcagaccttggccccattaaatccctt
cggacacttagagctttaagacctctaagagctttatctaggtttgaaggaatgagggtg
gttgtgaatgcacttataggtgcaattccatccatcatgaatgttctcctggtgtgtctt
atattctggctaatatttagcattatgggagtaaatttgtttgctgggaagttctatgag
tgtgttaatactacagatgggtcacgttttccaacaaatctagttcaaaatcattccgac
tgttttgcactgatgaatgttagtcagaatgtacgatggaagaatctgaaggtgaacttt
gataacgttggacttggttacctgtctctgcttcaagttgcaacatttaagggatggatg
gatattatgtatgcagctgttgattctgttaatgtagacaagcagcccatatatgaatac
aatctctacatgtatatttattttgtcatctttatcatctttgggtcattcttcactttg
aacttattcattggtgtcatcatagataatttcaatcaacagaaaaagaagcttggaggt
caagatatctttatgacagaagaacagaagaaatattataatgcaatgaaaaagcttgga
tctaagaaaccacaaaagccaatacctcggccagggaacaaattccaaggatgtatattt
gacctagtaacaaatcaagtttttgatataaccatcatggtacttatctgcctcaacatg
gtaaccatgatggtagaaaaagagggacaaagtaaatacatgactgatgttttatattgg
ataaatgtggtttttattatccttttcactggagaatgtgtgctgaaattgatctccctc
agacactactacttcactgtaggatggaacatttttgactttgtggttgtgattctctcc
attgtaggcatgtttctggctgagctgatagaaaaatactttgtgtcccccaccctgttc
cgagtgatccggctcgccaggatcggtcgaatcttgcgtctgatcaaaggggcgaagggg
atccgcacactgctctttgctctgatgatgtccctccctgccttgtttaacatcggcctc
ctgctcttcctggtcatgttcatctatgccatctttggaatgtccaactttgcctatgtt
aaaaaggaagctggaattaacgacatgttcaactttgagacctttggcaacagcatgatc
tgcttgttccaaattaccacctcagctggctgggacggattgctagcacctattctcaac
agtgcaccacctgactgtgaccccaaaaaagttcaccctggaagttcagtcgaaggggac
tgcgggaacccctctgtcgggatattctattttgtcagttacatcatcatctcctttctg
gttgtggtgaacatgtacatcgctgtcatcctggagaacttcagtgttgctactgaggaa
agtaccgagcccctgagcgaggatgactttgagatgttctatgaggtttgggagaagttt
gatcctgatgccacccagtttatagaatatagcaaactctctgattttgcagctgccctg
gatcctcctcttctcatagcaaaaccaaacaaagtccagctcattgccatggacctgccc
atggtcagtggggaccggatccattgtcttgatatcttatttgcttttacaaagcgtgtt
ttgggtgaaagcggagaaatggactctctgcgttcacagatggaagaaaggttcatgtca
gcaaatccttctaaagtgtcctatgaacccataacaactacactaaaacgaaaacaagag
gatgtgtctgctactgtcattcagcgtgcttacagacgttaccgcttacggcaaaatgtc
aaaaatatatcgagtatatacataaaagatggagaccgagatgatgatttgcccaataaa
gaggatatggtttttgataacattgagaactcaagtccagaaaaaactgatgcaacccca
tctactgtgtctccaccttcatatgacagtgtaacaaagccagacaaagagaaatatgaa
aaagacaaaacagaaaaggaagacaaagggaaagatggcaaggaaagcaaaaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (20)   
   RefSeq(pep) (20)   
DNA sequence (20)   
   RefSeq(nuc) (20)   
Protein domain (8)   
   Pfam (8)   
All databases (68)   

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