KEGG   Canis lupus familiaris (dog): 100856711
Entry
100856711         CDS       T01007                                 
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
  KO
K19479  collagen type X alpha
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100856711 (COL10A1)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 100856711
NCBI-ProteinID: XP_003639449
VGNC: 39455
UniProt: A0A8P0STM6
Position
12:complement(71564697..71571376)
AA seq 676 aa
MLPQTALLLLMSLNLVHGEFYAERYQTPTGIKGPPPPPNTKTQFFIPYAIKSKGVSVRGE
QGIPGPQGPAGPRGHPGPSGPPGKPGHGSPGPQGEPGLPGPPGPSATGKPGLPGLPGKPG
SKGPSGPKGDIGPAGLPGPRGPPGPPGSPGPAGITIPGKPGQQGPMGAPGPRGFPGEKGA
PGVPGVHGQKGETGYGAPGRPGERGPPGPQGPLGPPGPPGVGKRGETGFPGQPGIKGDRG
FPGERGAAGPPGPQGPPGERGPEGTGKPGAPGAPGQPGIPGTKGHPGAPGIAGSPGAPGF
GKPGLPGLKGQRGPIGLPGSPGAKGEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNQGIP
GPKGEMGPVGPAGHPGAKGERGSSGLDGKPGYPGEPGSSGPKGNSGLPGPKGDAGLRGSP
GLPGPVGPAGAKGTPGHNGETGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGIPGPPGPA
GVATKGLNGPTGPPGPPGPRGHAGEPGLPGPPGPPGPPGQAASSEGFIKAGQQPFVSAHQ
GVTGMPMSAFTVILSKAYPAVGIPIPFDKILYNKQQHYDPRTGIFTCQIPGTYYFSYHVH
VKSTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAVLELTENDQVWLQLPNTGSNGLYS
SQYVHSSFSGFLVAPM
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgctgccacaaacagcccttttgctgctaatgtccttgaacctggttcatggagaattt
tatgctgagcgataccaaacacctacgggcataaaaggcccaccaccaccacccaacacc
aagacacagttcttcattccctatgccataaagagtaaaggtgtatcagtaagaggagag
caaggtattcctggtccacaaggccccgctggacctcgagggcacccagggccatcagga
ccaccaggaaaaccaggccacggaagtcctggaccccaaggagagccggggttgcctggc
ccaccgggaccatcggccactgggaagccaggtttgccaggactgccaggaaaaccaggg
tcgaaaggaccatctggaccaaaaggagatattggaccagctggtttaccgggaccacgg
ggcccaccagggccacccggaagccccggcccagctggaattactattccaggaaaacct
ggacaacagggacctatgggagccccaggacccaggggatttccaggagaaaagggggca
ccaggagtccctggtgtgcatggacagaaaggggaaacaggatatggcgctcctggacgc
ccaggtgagagaggccctcctggccctcagggtcccctgggacccccgggcccacctgga
gtgggaaaaagaggtgaaactggctttccaggacagccaggcatcaaaggtgatcggggc
tttccaggagagaggggagcagctggcccaccaggcccccaaggtcctcccggggaacga
ggaccagaaggcactgggaagccaggagccccaggagccccaggccagccagggattcct
gggacaaaaggtcaccctggcgctcccggaatagctgggtccccaggggctcctggcttc
gggaaaccggggttgccaggcctaaagggacaaagaggacccattggccttccaggaagt
ccaggtgctaaaggggaacaaggcccggcaggtcatcccggggaaccaggtctgactgga
cctcccggaaatatgggaccccaaggaccaaaaggcatcccaggcaaccaagggattcca
ggccctaaaggtgagatggggccagtggggcctgcaggacaccctggggcaaagggagaa
aggggttcctctgggttagatggaaaaccggggtaccccggagaaccaggcagcagtggt
cctaagggaaactcagggttaccgggccctaaaggtgatgctggactcagagggtctcct
ggtcttccaggccccgtgggcccggcaggcgctaagggaacgcctggacacaatggtgag
actggtccaagaggtgctcctggaatcccaggaaccagaggccccattgggccgccaggc
attcccggattccctggatctaaaggggatccaggaattccaggtccccctggcccagct
ggcgtggcaactaaggggcttaatggtcccactgggccaccagggcctccgggtccgaga
ggccacgctggagagcctggcctcccaggtcccccaggccccccgggccccccgggccaa
gcggcctcgtctgagggcttcataaaggcaggccaacagcctttcgttagcgcccaccag
ggagtaacaggaatgccgatgtctgcgttcactgtcatcctctccaaagcttatccggcc
gtgggtattcccatcccatttgataagatcttgtataacaagcaacagcattatgaccca
agaactggaatcttcacctgccagatcccaggaacatactatttctcctaccacgtgcat
gtgaaaagcacccacgtttgggtgggcctctataagaacggcacccctgtgatgtacacc
tacgacgaatacaccaagggctacctggatcaggcttcggggagcgccgtgctcgagctc
acggagaacgaccaggtgtggctccagctgcccaacacgggatcgaacgggctgtactcc
tcccagtacgtccactcctctttctcagggttcctggtggcaccaatgtga

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (47)   

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