KEGG   Canis lupus familiaris (dog): 403763
Entry
403763            CDS       T01007                                 
Symbol
MMP13
Name
(RefSeq) collagenase 3
  KO
K07994  matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04657  IL-17 signaling pathway
cfa04926  Relaxin signaling pathway
cfa04928  Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    403763 (MMP13)
  09152 Endocrine system
   04926 Relaxin signaling pathway
    403763 (MMP13)
   04928 Parathyroid hormone synthesis, secretion and action
    403763 (MMP13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cfa01002]
    403763 (MMP13)
Peptidases and inhibitors [BR:cfa01002]
 Metallo peptidases
  Family M10
   403763 (MMP13)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_3 Reprolysin_4 Reprolysin_5 DUF4953
Other DBs
NCBI-GeneID: 403763
NCBI-ProteinID: XP_536598
Ensembl: ENSCAFG00000015043
VGNC: 43276
UniProt: A0A8C0Z2W1 A0A8I3MWY2
Position
5:28800013..28811179
AA seq 470 aa
MLPGILAAFLCLSWTQCWSLPLPSDGDDDLSEEDFQLAERYLKSYYYPLNPAGILKKSAA
GSVADRLREMQSFFGLEVTGKLDDNTLDIMKKPRCGVPDVGEYNVFPRTLKWSKTNLTYR
IVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGTADIMISFGTKEHGDFYPFDGP
SGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMF
PIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPRHPKTPDKCDPSLSLDAITSLRGETM
IFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSRDLIFIFRGRKYWALNGYD
ILEGYPQKISELGFPKEVKKISAAVHFEDTGKTLFFSGNQVWSYDDTNQIMDKDYPRLIE
EDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYNIWSKRIVRVMPANSLLWC
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgctcccaggcatcctggctgccttcctctgcttgagctggactcagtgctggtccctg
ccccttcccagcgatggtgatgatgatctgtctgaggaagacttccagcttgcagagcgc
tacctgaaatcctactactatcccctgaatcctgctggaatcctgaagaagtctgcagca
ggctcagtggctgacaggcttcgagaaatgcagtccttcttcggcttagaggtcactggc
aaacttgatgataataccttggacatcatgaagaaaccaagatgtggggtccctgatgtg
ggcgagtacaatgttttcccccgaactctcaagtggtccaaaacgaacctaacctacagg
attgtgaactatacccctgatctgactcattctgaagttgaaaaggcattcaaaaaagct
ttcaaagtttggtcagatgtgacacctctgaattttaccagacttcatgacggcactgca
gatatcatgatctcttttggaactaaagagcatggggacttctatccatttgatggacct
tctggtcttctggctcatgcttttcctcctgggccaaattatggaggagatgcccatttt
gatgatgatgaaacttggacaagtagttccaaaggctacaacttgttccttgtcgctgcc
catgagttcggccactccttaggtcttgaccactccaaggacccgggagcactcatgttt
cccatctacacctacacgggcaaaagccactttatgcttcccgatgatgatgtgcaaggg
atccagtctctctatggcccaggagatgaagaccccaaccccagacatcccaaaacacca
gacaaatgtgatccctccttatcccttgatgccatcaccagcctccgaggagaaacaatg
atctttaaagacagattcttctggcgattgcatcctcagcaggtggatgcggagctgttt
ttaacaaaatccttttggccggaacttcccaaccgtatcgatgctgcatatgagcacccc
tcccgcgaccttatcttcatcttcagaggcagaaaatattgggctcttaatggttatgac
attctggaaggttatccccaaaaaatatctgaactgggatttccaaaagaggttaagaag
ataagtgcagctgttcactttgaggacacggggaagacgctcttcttctcgggaaaccag
gtctggagctatgatgatactaaccagatcatggataaagactaccccaggctgatagaa
gaggacttcccagggattggtgataaagtggatgccgtctatgagaaaaacggttatatc
tattttttcaatgggcccatccagtttgagtataacatctggagtaagcggattgtccgt
gtcatgccagcaaactccctgttgtggtgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system