KEGG   Canis lupus familiaris (dog): 475922
Entry
475922            CDS       T01007                                 
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03013  Nucleocytoplasmic transport
cfa03015  mRNA surveillance pathway
cfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    475922 (EIF4A3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    475922 (EIF4A3)
   03015 mRNA surveillance pathway
    475922 (EIF4A3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    475922 (EIF4A3)
   03041 Spliceosome [BR:cfa03041]
    475922 (EIF4A3)
   03009 Ribosome biogenesis [BR:cfa03009]
    475922 (EIF4A3)
   03012 Translation factors [BR:cfa03012]
    475922 (EIF4A3)
Enzymes [BR:cfa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     475922 (EIF4A3)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     475922 (EIF4A3)
   mRNA cycle factors
    Stress granule specific factors
     475922 (EIF4A3)
Spliceosome [BR:cfa03041]
 Complex C
  Other components
   EJC/TREX
    475922 (EIF4A3)
Ribosome biogenesis [BR:cfa03009]
 Eukaryotic type
  90S particles
   Helicases
    475922 (EIF4A3)
Translation factors [BR:cfa03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    475922 (EIF4A3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 Flavi_DEAD
Other DBs
NCBI-GeneID: 475922
NCBI-ProteinID: XP_533130
Ensembl: ENSCAFG00000005614
VGNC: 40281
UniProt: A0A8C0RW66 A0A8I3NS82
Position
9:2222792..2233743
AA seq 411 aa
MAAAATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggcggccgcggccacgatggcgacctcgggctcggcgcggaagcggctgctcaaagag
gaagacatgaccaaagtggagttcgagaccagcgaggaggtggacgtgacgcccacgttc
gacaccatgggcctgcgggaggacctgctgcgcggcatctacgcctacggttttgagaaa
ccatcagccatccagcagcgagccatcaagcagataattaaagggagagacgtcattgct
caatcacaatctggcacaggcaaaactgccaccttcagcatttctgtcctccagtgtttg
gatattcaggttcgtgaaacccaggctttgatcttggctccaacgagagaattagctgtg
cagatccagaagggtctgctcgctctgggggactacatgaatgtgcagtgccatgcctgc
atcgggggcaccaatgtgggagaggacatcaggaagctggactacgggcagcacgttgtt
gctggcacacctggacgtgtctttgatatgattcggcgcaggagtttgaggacacgggcc
atcaagatgttggtgttggatgaggctgatgaaatgttaaataaaggtttcaaggagcag
atttacgatgtgtacaggtacttgcccccggccacgcaggtggtgctcatcagtgccacg
ctgcctcacgaaatcctggagatgaccaacaagttcatgacggaccccatccgcatcttg
gtgaagcgtgatgaattgactctagaaggcatcaagcagttttttgtggcggtggagagg
gaagagtggaaatttgacacactgtgtgacctctacgacacgctgaccatcactcaggcc
gtcatcttctgtaacaccaaaaggaaggtcgactggctgacagagaagatgagagaagcc
aatttcacggtgtcgtccatgcacggggacatgccgcagaaagagcgcgagtccatcatg
aaggagttccggtctggtgccagccgggtgctcatctccacagacgtctgggcccggggg
ctggacgtcccacaggtgtccctcatcattaactacgacctgcccaacaacagagagttg
tacatacacagaatcgggcggtcgggccgctacggccgcaagggggtggccatcaacttc
gtgaagaatgacgacatccgcatcctgagggacatcgagcagtactactccacccagatc
gatgagatgcccatgaacgtggcggatctgatctga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (314)   
   KEGG ORTHOLOGY (1)   
   RefGene (308)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (343)   

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