KEGG   Canis lupus familiaris (dog): 479252
Entry
479252            CDS       T01007                                 
Symbol
VCL
Name
(RefSeq) vinculin isoform X14
  KO
K05700  vinculin
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04510  Focal adhesion
cfa04520  Adherens junction
cfa04670  Leukocyte transendothelial migration
cfa04810  Regulation of actin cytoskeleton
cfa04820  Cytoskeleton in muscle cells
cfa05100  Bacterial invasion of epithelial cells
cfa05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    479252 (VCL)
   04520 Adherens junction
    479252 (VCL)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    479252 (VCL)
   04810 Regulation of actin cytoskeleton
    479252 (VCL)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    479252 (VCL)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    479252 (VCL)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    479252 (VCL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cfa04812]
    479252 (VCL)
   04147 Exosome [BR:cfa04147]
    479252 (VCL)
Cytoskeleton proteins [BR:cfa04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     479252 (VCL)
Exosome [BR:cfa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   479252 (VCL)
SSDB
Motif
Pfam: Vinculin VMAP-M0
Other DBs
NCBI-GeneID: 479252
NCBI-ProteinID: XP_038347906
Ensembl: ENSCAFG00000015254
VGNC: 48242
Position
4:24541842..24656546
AA seq 1135 aa
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAI
RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVAELRARGQGASPVAMQKAQQVSQG
LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA
ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR
AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ
DLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPPDAPSREEVFDERAANFEHHSGRLGATAEKAAAVGTANKSTVE
GIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEQLRLADELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMM
MAARQLHDEARKWSSKPGNRAAEVGIGVVAEADAADAVGFPVPPDMEDDFEPELLLMPSN
QPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCA
KDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI
SDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgccggtgtttcatacgcgcacgatcgagagcatcttggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggcaaagccatccctgacctc
accgcgcccgtggccgccgtgcaggcggccgtcagcaaccttgtccgggttggaaaagag
actgttcaaaccaccgaagatcagattttgaagagagatatgccaccagcatttattaag
gttgagaatgcttgcaccaagcttgtccaggcagcccagatgcttcagtcagatccttac
tcagtgcctgctcgagattatctaattgatgggtcaaggggcatcctctccggcacatca
gacctgctcctcaccttcgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaagtggtggaaactatggaagatttggtcacctac
acaaagaatcttggaccaggaatgactaagatggccaagatgattgatgagaggcagcag
gaactgactcaccaggagcaccgagtaatgttggtgaactccatgaacaccgtgaaagag
ttgctgccagttctcatttcagctatgaagatttttgtaacaactaaaaattcaaaaaac
caaggaatagaagaagctttgaaaaatcgcaattttactgtagagaagatgagtgctgaa
attaatgagatcattcgtgtattacaactcacttcttgggatgaagatgcctgggccagc
aagaaggacactgaagccatgaagagagcattggcctccatagactccaaactgaaccag
gccaaaggttggctccgtgatcccagtgcctctccaggggatgctggtgagcaggccatc
agacagatcttagatgaagctggaaaagtcggtgaactctgcgcaggcaaagagcgcagg
gagatcctgggaacctgtaaaatgctggggcagatgactgatcaagtggctgaactccga
gccagaggacaaggagcctcaccagtggccatgcagaaagcccagcaggtgtctcagggt
ctggatgtgctcacagcaaaagtggaaaatgcagcccgcaagctggaagctatgaccaac
tcaaagcagagcattgccaagaagattgatgctgctcagaattggcttgcagatccaaat
ggtggaccagaaggagaagaacagattcgaggggctttggctgaagctaggaaaatagca
gagttgtgtgatgatcctaaagagagggatgacattctacgttctcttggggagatatct
gctctgacttctaaattagcagatctgcggagacagggcaaaggagattccccagaggcc
cgagcattggccaaacaggtggccacagccctgcagaacttgcagaccaaaactaatagg
gctgtggccaatagcaggcccgccaaggcagctgtccaccttgaaggcaagattgagcaa
gcacagcggtggattgataatcccacagtggatgaccggggtgttggtcaggctgccatc
cgggggcttgtggccgaagggcatcgtctggctaatgtcatgatggggccatatcgccaa
gatcttcttgccaagtgtgaccgggtggaccagctgacagcccagctggctgaccttgct
gccagaggggaaggagagagtcctcaggcgagagcacttgcctctcagctccaagactcc
ttaaaggatctgaaagcccggatgcaggaggcgatgactcaggaggtgtcagatgttttc
agcgataccacaactcccatcaagctgttggcagtggcggccactgcacctcctgatgct
cccagtagggaggaagtatttgatgagagggcagctaactttgagcaccattcaggaagg
cttggtgccacagcggagaaggcggctgctgttggaactgctaataaatccaccgtagaa
ggcattcaggcatcagtaaagacggcccgagaactcacaccccaggtggtctcagctgct
cgcattttacttaggaatcctggaaatcaagctgcttacgaacactttgagaccatgaag
aaccagtggatcgataatgttgaaaaaatgacagggctggtggacgaagctattgatacc
aaatctctgttggatgcttccgaagaagcaattaaaaaagacctggacaagtgtaaagta
gccatggccaacattcagccacagatgttggtcgccggggcgacgagcatcgctcgccgg
gccaaccgtatcctgctggtggctaagagggaggtggagaactctgaggatcctaagttc
cgtgaggctgtgaaagctgcctccgatgaattgagcaaaaccatctccccaatggtgatg
gatgcaaaggctgtggctggaaacatttccgaccctggcctgcaaaagagcttcctggac
tcaggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggag
cctgacttcccgcctcctcctccagatcttgaacagctccgtctggcagatgagcttgct
cctcccaaaccacctctgcctgagggtgaggtccctccgcccaggcccccaccaccagag
gagaaggatgaagagttccctgagcagaaagccggggaggtgattaaccagccaatgatg
atggctgccaggcagctccatgatgaggctcgcaaatggtccagcaagccgggtaaccga
gccgctgaggtgggtataggcgttgtagctgaggcagatgcggccgatgctgtcgggttc
cctgtcccccctgacatggaagacgatttcgaacctgagctgctgttaatgccatccaat
cagccggtcaaccagcccattctggccgcggctcagtcattgcatcgggaagctaccaag
tggtctagtaagggcaatgacatcattgcagcagccaaacgcatggctctgctgatggct
gagatgtctcggctggtaagagggggcagtggtaccaagcgggcactgattcagtgtgcc
aaggacattgccaaggcctcagatgaggtgacgcggttggccaaggaggttgccaagcag
tgcacagataagcggattagaaccaacctcttacaggtatgcgagcgaatcccaaccata
agcacccaactcaagatcctgtccacggtgaaggccaccatgctgggtcgcaccaacatc
agtgatgaggagtctgagcaggccacagagatgctggttcacaatgcccagaacctcatg
cagtcagtgaaggagactgttcgagaagcagaagctgcttcaatcaaaattcgaacagat
gctggatttacactgcgctgggttagaaagactccctggtaccagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (17)   
   RefSeq(pep) (17)   
DNA sequence (19)   
   RefSeq(nuc) (17)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (64)   

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