KEGG   Corynebacterium flavescens: CFLV_09265
Entry
CFLV_09265        CDS       T05018                                 
Name
(GenBank) hypothetical protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
cfc  Corynebacterium flavescens
Pathway
cfc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFLV_09265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfc03019]
    CFLV_09265
   03009 Ribosome biogenesis [BR:cfc03009]
    CFLV_09265
Enzymes [BR:cfc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     CFLV_09265
Messenger RNA biogenesis [BR:cfc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CFLV_09265
Ribosome biogenesis [BR:cfc03009]
 Prokaryotic type
  rRNA processing factors
   CFLV_09265
SSDB
Motif
Pfam: RNase_E_G IF2_N S1 TcdA_TcdB DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: APT87358
UniProt: A0A1L7CNF8
Position
complement(2002331..2006206)
AA seq 1291 aa
MQNASENTGSHAAAVAFAQHIDREALPAKTRLYTLAKQLGIASREIVTEFGKLGVKKAAQ
SSVSKQEVVLLLDSLVASAPAEDKQAQQERPEKKSKKPATKPRRKATTKAATKAAEKPKK
ATKKSKAVDPELAPSVEETPAAVQDNADEAADVAGAAGGEAGKPAKKTTRKAGRKATRKA
VRKSSSPKKDKEAVAEVKPGEDEKAEHSENLAPLAANADVSAKSAGEEDEQEAKLRTRVR
KNVENEIAQIEEKVDSQLADTVENPEHSGANSEGSAESSQDAAQSAETVADAQAAEDVVA
QLQEALEEAGEQSHDFDDLGEDYRPIITPKPGADSQTYELAPVFMPPHVQPASASVPEFT
GEDDSEEEEAKGSRRRGRRGTSRGRGSQEHAAKATSDAAAEGDEVEEDLIEEPKAIKGST
RIEAQRRRRAELREKGRERQHIVSQAEFLARRESVERTMVVRDKQRKDGAGVVTQVGVLE
DDLLVEHFVTSESQTSLIGNIYLGRVQNVLPSMEAAFVDIGQGRNGVLYAGEVDWRSTKL
GGRARRIENALKSGDQVLVQVAKDPIGHKGARLTTQISLAGRYLVYVPGGRSAGISRKLP
APERKRLKSILENVIPGRGGAIIRTAAENVPEDAIAADVRRLNNTWQDITERANEEKSSK
GAKPVTLYEEPDVLVKVVRDLFNEDFHQLVVDGTRSYNVVRAYVDSMAPDLADRVVQYRA
AEHGGMDAFETYRIDEQLHKALSRKVWLPSGGTLIIDRTEAMTVIDVNTGKFTGSGGNLE
ETVTRNNLEAAEEIVRQMRLRDIGGMIVVDFIDMVLPENQDLVLRRLKETLERDRTRHQV
SEVTSLGLVQMTRKRLGTGLIETFATECEHCHGRGLIIHEYPVDEIAEEEHNDHASRHPK
KAHQHKSEKKLEGEDTQQRNSRQRHSIEDLVANVIVDDEEDSDASHAEGDKNAGDGQRSK
RRAQRSRRGRRGHDELHHDEPRHHESRHEGSEHTSAAEDIASIGYAAAESAAAQDEVAEF
NSYVADEPPVESVVERTVEHSGESKEDSKELNSARRSRRTSRRGVRSAQRAASTQEPAKA
TELEVETRAEAQGTSRMTFAQAQAEFEASPRRKRATRGNSRSDHAPRPEDYVDSAVGSTS
AVSGETASEDPAVSAQAAQAAQPAQAEPAAAQPARTRGHRRAVRNTSKRASHKQAAAATV
KAQPKKKHASPVETSPEQAPSAEPGVETKVIRRGRKRAVRKVTAVRQAPRRAEKKEQATV
KESAAESWEESAAPNRGNGRGRRRLARRRSK
NT seq 3876 nt   +upstreamnt  +downstreamnt
atccagaatgcttcagaaaatactggaagccatgctgccgcggttgccttcgcacagcac
attgatcgggaggccctgccagcgaagactcgcctctacactttggccaagcagctaggg
attgcttcccgggagatagtcacggagtttggcaagctaggggtgaagaaggctgcacaa
tcttcggtgagcaagcaggaggttgtccttctgcttgactccctcgttgcttccgcgccc
gcagaggacaagcaagcacagcaagagcggccagagaaaaagtcgaagaagccggcgact
aagccgcgtcgcaaggccactacgaaggccgccacaaaggccgcggagaagccaaagaag
gcgactaagaagtccaaggcagtggacccggagctcgcgcctagcgttgaggagactcca
gctgctgttcaagacaatgcagacgaagcggcagacgtagcgggcgcagcaggaggagaa
gcaggaaagcccgctaagaagacgacacgtaaggcgggccgcaaagcaacgcgcaaggct
gtgcgcaagtccagttctcccaagaaggacaaggaagctgtcgccgaagtaaagcccggc
gaggacgagaaagccgagcacagcgaaaacttggctccgcttgcagcaaacgctgatgtg
agcgccaagagcgcgggcgaagaagatgagcaggaagcaaagctgcggacccgcgtgcgc
aagaacgtcgagaacgaaattgcgcagatcgaagagaaggtcgactcgcagttggccgat
actgtggagaatcctgagcattcaggggccaactcagaaggcagcgcagaaagcagccag
gatgcagcgcagagtgctgaaaccgtagctgacgcgcaggctgctgaggacgtggttgcc
cagttgcaggaagccctcgaggaagccggtgaacaatcgcacgacttcgacgatcttggc
gaggattatcggcctatcatcactccgaagccaggcgctgattctcaaacttacgaatta
gcacctgtgtttatgccgccgcatgtgcagccggcgtctgcttccgtgcctgagttcacc
ggggaagatgactcggaagaggaagaagcgaagggttcgcgtcggcgtggacgccggggg
acatcgcgcggtcggggatcgcaagaacatgcggcaaaggctacgtcggatgccgccgca
gaaggagatgaggtcgaggaagatctcatcgaggagcccaaagcaatcaagggctcaacg
cgcattgaggcgcaacgccgtcgccgtgccgagttgagggagaagggccgcgagcgccag
cacattgtctcccaggcagagttcttagcacgccgcgaatccgtcgaacgcaccatggtt
gtgcgagataagcagcgcaaggatggcgcgggagttgttactcaggtgggcgtcttggaa
gatgatctcctcgtcgagcacttcgtgaccagtgagtcccagacctccctgattggcaac
atctacttgggccgtgtgcaaaacgtgttgccctcgatggaggcggccttcgtcgatatc
ggacaggggcgcaatggcgtcctctatgccggtgaggtggactggcgttcaaccaagctc
ggcggtcgcgctcgcaggattgaaaatgctttgaagtctggggaccaggtcctcgtgcag
gtggctaaggatcccatcggacataagggtgcgcggttgaccacgcagatctcccttgcc
ggacgctacttggtctacgtgccaggtggtcgaagtgctggaatctcgcgcaagctgccc
gcgccggagcggaagcgtttgaagagcatcctggaaaacgtgatcccgggtcgcgggggt
gccatcatccgcaccgcggcggagaacgtgccggaagacgccattgccgctgatgtacgc
cgcctcaacaacacctggcaagacatcactgagcgtgccaacgaggaaaagtcctccaag
ggagccaagccggtcaccctctacgaggagccggatgtgctggttaaggtcgttcgtgat
cttttcaatgaggacttccaccagctcgttgttgatggcactcgttcctataacgtcgtg
cgagcttatgtggattcaatggcgcccgatctcgcggaccgcgtcgtgcaataccgggca
gcagagcatggtggcatggatgcatttgagacttatcgcatcgatgagcagcttcacaag
gcactcagccgtaaggtgtggctgccttcgggcggcacgctcatcattgaccgcaccgag
gctatgacggtcatcgacgtcaacacaggtaagtttacgggctccggtggaaacctggag
gagacagtaacccgtaacaaccttgaggccgccgaggagatcgtgcgccagatgcggctg
cgcgatatcggcggaatgatcgtggtggacttcatcgatatggttctgcccgaaaaccag
gatctggtcttacgccgtctcaaagagaccctcgaacgtgatcgcacccgtcaccaggtt
tcggaggtcacgtcactgggcctggtgcagatgactcgtaagcgtctgggcactggcctg
atcgaaaccttcgccaccgagtgtgagcactgtcatgggcgcgggctcatcatccacgag
tatcccgtggatgagatcgctgaggaagagcacaatgatcacgcgtcgcgtcatcccaag
aaggctcaccaacacaagtcggagaagaagctggaaggagaagacactcagcagcgcaat
tctcgccagcgccattccatcgaggatctcgtagccaatgtcatcgttgatgatgaggaa
gactcggacgcgtcgcacgcagaaggcgacaagaatgccggagacggccagcgaagcaag
cgtcgcgcgcagcgttcacgccgcggtcgtcgtggacatgacgagctccaccacgatgag
cctcgccatcatgagtcccgacatgaaggctctgaacacacctcggcagcggaggacata
gcctccattggctatgcggcggcggaaagcgctgcggcccaagatgaggtggcggagttt
aactcttatgtggcagatgagccccctgtagagtctgttgtcgagcggactgttgaacat
tcaggtgagtctaaggaggactcgaaagaactcaattcagcacgccgatcacgtcgcacg
tcgcggcgtggggtgcgatcggcacagcgcgctgcatctactcaggagcctgcaaaggcg
acggagctagaggtagagacacgggcagaggcacagggtacctcccgtatgacctttgct
caggcgcaggcagagtttgaggcctcgccgcggcgcaagcgcgcaacgcgtggaaactcg
cgttctgatcatgctccgcgtccggaagattacgtagattccgcagttggcagcacgtcc
gctgtctccggagagacagcttcggaagatcccgctgtttcggctcaagctgctcaagct
gcgcagcccgcacaagcagaacctgccgccgcgcaaccagcgcggacacgggggcatcgt
agggcggtgcgcaatacgtcaaagcgcgcgagccataagcaggccgctgcggcaacagtg
aaggcgcagccgaagaagaagcacgcgtctcctgtggaaacttctccggagcaggctcct
tccgcagagcctggtgtcgagaccaaggtgattcggcgcggtcgcaagcgcgctgtgcgc
aaggtgactgcggtgcggcaagcgccacggagagctgagaagaaggagcaggcgaccgta
aaggagtctgcagctgagtcctgggaggaatccgctgcgccaaaccgcggcaatggccgg
ggacggcgccgcctagcacggcgacggagcaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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