KEGG   Campylobacter fetus subsp. fetus 82-40: CFF8240_0791
Entry
CFF8240_0791      CDS       T00430                                 
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cff  Campylobacter fetus subsp. fetus 82-40
Pathway
cff03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cff00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFF8240_0791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cff03019]
    CFF8240_0791
Enzymes [BR:cff01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CFF8240_0791
Messenger RNA biogenesis [BR:cff03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CFF8240_0791
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 SUa-2TM AAA_22
Other DBs
NCBI-ProteinID: ABK82754
UniProt: A0RP33
Position
801778..803652
AA seq 624 aa
MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPIL
EKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQA
LKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKR
QNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLNEVFG
VESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKILVA
TDIAARGLDIKELPFVINLELPNVPEDYVHRIGRTGRAGNDGVAISLVCVDEFKFLIDIE
KLIDKKLIRESFSGFEADLRVKPQPIRRGQNMNKSSERDDRNGNKIDKKERKPREFNSDK
KDESKRGRNRDDFKGEFRDRPKKDDKRKFDDKRSKFGFDKDFGTDERETKKDGDFKRKFK
KDESKREYRRDGVKSEFSKDKKEFSKNSRAKDSNSSFDGEAKREFKFKKDDKKFGEKKKS
FGDKKSFDDKDKKFSGEKKFSSDKKPRSSDKSSDEKYSGNKFSPKKKFGSDKPDRGDKFT
KDAPKPRASSRPRKPQSDKKSTTK
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgttattttcagatttcgatctcagctctgctatattagaagcattaaaagagctaaat
tacgacgctcctacgcagatccaacaagtcgcgatacctgctataatgcaaggaaaagat
atcttagcaggagctaggacaggcacgggaaaaactgctgcatttgcgctacctatatta
gaaaaattatcgtcaaaagaacgcaacaaaaagcgtcctcaaactcgtgttttagtgctt
gttcctacaagagaacttgcaaatcaagtcacgcaaaacatcaaatcttacgcgaaaaag
ttaccgtttaaaactttgccagtatttggcggagttagctcttacccacaaattcaagct
ttaaaaagtggtatagatatcgtggtggcgactcctggcagacttttggatcttgctttg
caaaatgctttaagcttagagcatatcgatacgctagtatttgacgaggctgatcgtatg
tttgatatgggatttatccacgatatcaaacaaatagtaaaaatgcttcctgaaaaaaga
caaaatttactattttccgcgacgtatccaagtgaggttatgtcgctttgtaactctatg
ctaaaagatcctttgcgtatccaaatagaagagcaaaacagcactgctttaaatatcata
caacgcgtgattttagtagatcgagataaaaaaatggagcttttaaacgaggtttttgga
gtggagagtatagatcaagctttggtttttactcgtaccaaaagaagtgcggataaatgt
tcatcttatctacatactttaggctttagcgtagctgctttgcatggagataaaagtcaa
agcgtgcgttcaaaaacacttgagaaatttaaaaacggtaaaacaaaaattcttgtagca
acggatatagcagcgcgcggattagacataaaagaacttccgtttgttataaatttagag
cttccaaatgtgcctgaggattatgttcataggataggtagaacaggacgcgccggaaat
gatggcgttgcgatatctttggtttgcgttgatgagtttaagtttttaatcgatattgaa
aaattgatcgataaaaaactaataagagaaagctttagcggatttgaagccgatctaaga
gtaaaacctcagcctatcagacgtggacaaaatatgaacaaaagctcagaacgagatgac
agaaacggaaataaaatagataaaaaagagagaaagccaagagagtttaatagcgataaa
aaagacgagtcaaaacgcggtagaaatagagatgattttaagggtgaatttagggacaga
ccaaaaaaagacgataaaagaaaatttgatgataagagatctaaattcggctttgataaa
gactttggcacagatgagcgcgagacgaaaaaagacggcgattttaaacgtaaatttaaa
aaagacgagtcaaaacgcgaatacagaagagatggtgtcaagagtgaattttcaaaagac
aaaaaggaattttctaaaaatagtcgcgcaaaagattcaaatagtagttttgatggcgaa
gcaaaaagagaattcaaatttaaaaaagacgataaaaaatttggcgagaaaaagaaatct
ttcggcgataaaaaatcttttgatgacaaagacaaaaaatttagcggcgaaaagaaattt
agctctgataaaaagcctagaagtagtgacaaaagttctgatgaaaaatattctggtaat
aaatttagcccgaaaaagaaatttggaagtgacaaaccagacagaggcgataaatttact
aaagacgctccaaagccaagagcttcaagcagaccacgcaaaccacaatctgataaaaaa
tccactacaaaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (31)   

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