KEGG T01490: Celf

Cellulomonas fimi: Celf_1917

Entry

Celf_1917 CDS T01490

Definition

DNA polymerase LigD, polymerase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

cfi Cellulomonas fimi

Pathway

cfi03410	Base excision repair
cfi03420	Nucleotide excision repair
cfi03430	Mismatch repair
cfi03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:cfi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cfi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cfi03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:cfi03450]

SSDB

Motif

Pfam:

Prim-Pol DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2122054..2122935)

AA seq 293 aa
MTPERQTVDVAGRHVRVTHLEKVMYPSTGTTKAEVMDYLVRVAPALLPQLHERPVTRIRW
PDGVAGEKFFEKNVPRGAPEWLRRQTLPAAPNNDDDEGTELVLPFVDDLAGLVWCANQGA
LELHTPQWTVGPRGGVRPPDRLVIDLDPGAPAGLDECARVAHLVADRLRDDGLGETVPVT
SGSKGMQLYARLPGKRSAPEVRQYARDLAFALAKQHPSLVVAVMRKELRGGKVLLDWSQN
HPAKTTITPYSLRGRELPRVAAPRWWDEIGPGLDQLGPDEVVDRLARDGDPFA

NT seq 882 nt +upstreamnt +downstreamnt
gtgacacccgagcgccagaccgtcgacgtcgccggacgccacgtgcgcgtcacgcacctc
gagaaggtcatgtacccgtccacggggacgaccaaggccgaggtgatggactacctcgtg
cgcgtggcccccgccctgctcccccagctccacgaacgtcccgtgacgcggatccgctgg
cccgacggcgtcgccggggagaagttcttcgagaagaacgtcccgcgcggcgcccccgag
tggctgcgccggcagacgctgcccgcagccccgaacaacgacgacgacgaggggaccgag
ctcgtcctgccgttcgtcgacgacctcgcggggctcgtgtggtgcgccaaccagggggcg
ctcgagctgcacaccccgcagtggaccgtcggcccgcgcggcggcgtgcgcccgcccgac
cggctcgtgatcgacctggacccgggggcgcccgcggggctcgacgagtgcgcgcgggtc
gcgcacctcgtcgccgaccgcctgcgcgacgacggtctcggtgagaccgtgccggtgacc
tccggcagcaagggcatgcagctctacgcccgcctgccggggaagcggtccgcgcccgag
gtgcgccagtacgcgcgcgacctcgcgttcgcgctcgcgaagcagcacccgtcgctcgtc
gtcgcggtcatgcgcaaggagctgcgcggcgggaaggtgctgctcgactggtcgcagaac
caccccgccaagacgaccatcaccccgtactcgctgcgcggacgcgagctgccgcgcgtc
gccgctccgcgctggtgggacgagatcgggccggggctcgaccagctcggtcccgacgag
gtggtcgaccgcctggcacgtgacggcgacccgttcgcgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CFI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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