KEGG T01490: Celf

Cellulomonas fimi: Celf_2540

Entry

Celf_2540 CDS T01490

Definition

exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

cfi Cellulomonas fimi

Pathway

cfi03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cfi03440]

SSDB

Motif

Pfam:

AAA_30 AAA_19 UvrD_C_2 AAA_11 Helicase_RecD Viral_helicase1 AAA_22 PhoH UvrD-helicase AAA_28 DUF2075 T2SE NTPase_1 SRP54 NACHT AAA_10 AAA_5 AAA AAA_17 KTI12 AAA_18 MukB CbiA

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2829592..2831526

AA seq 644 aa
MTVDAPAGDGRGTDPRVPWRVDGLLAPFVRAGALASADVHVARRLGAIAHETDERVHLAV
ALAVAAVRAGSVCVELADAPGAVAALLDGADPPRAADLPWPALDGPDGWVAAVRRSPLVG
DGLDGADDRPVRWVDGRVYLDRYWRDELSVRREVEARLARGAPAAPGAADDQADIDAAGG
DGPVDGSNCSDGAIDDVARRLFPAATDDRQREALRTASTSLLTVLTGGPGTGKTTTVARL
VAALQATAGPGLRVALAAPTGKAASRLQESVNAQVATLDEDDRARVGTLTATTLHRLLGP
RPGSTTRFRHDRDRRLPHDVVVVDESSMVSLPLMARLVEALRPDARLVLVGDPDQLASVE
AGAVLGDLVASLHGRAVVRLTQTHRFGDDLAALAAAVRAGDADATLALLRTGGAHVRLTA
TEVDAPAPDDLVGLRHDVVTAGRALVAAARAGDAAAALAALGQHRLLLAHREGPAGVARW
AAQAEAWVEAATDARDSREPWPLGLPLLVTENDPSSGLSNGDTGVVVRDLVGTGTRGPAA
HGPAPGDAVVVAFGDPDRPHLVRPHRLPAVQPVHAMTVHRGQGSQFTRVTVLLPPATSPL
LTRELLYTAVTRARESVHVIGSPDAVRAAVERPVRRASGLRHPL

NT seq 1935 nt +upstreamnt +downstreamnt
gtgacggtcgacgcacctgccggggacgggcgaggcaccgatccccgcgtgccgtggcgt
gtcgacgggctgctcgccccgttcgtccgagcgggggcgctcgcgtcggcggacgtccat
gtggcgcgtcggctcggggcgatcgcgcacgagaccgacgagcgggtgcacctcgcggtc
gcgctcgcggtggcggccgtgcgggccgggtcggtctgcgtcgagctcgccgacgctccg
ggtgcggtcgccgcgctgctcgacggggccgatcccccgcgtgccgccgacctgccctgg
cccgcgctcgacggtcccgacggctgggtggccgccgtgcgccggagcccgctggtcggc
gacgggctcgacggtgccgacgaccggccggtccggtgggtggacggccgcgtctacctc
gaccggtactggcgcgacgagctgtcggtccgccgcgaggtcgaggcacgcctcgctcgc
ggggcaccggccgcacccggggccgcggacgaccaggccgacatcgacgcggcgggcggc
gacgggcccgtcgacggcagcaactgcagcgacggcgcgatcgacgacgtcgcacgcagg
ctgttccccgccgcgaccgacgaccggcagcgcgaggcgctgcggacggcgtcgacgtcg
ttgctgacggtcctgacgggcggccccggcacgggcaagaccacgacggtcgcgcggctc
gtcgccgcgctgcaggcgaccgccggaccgggcctgcgcgtcgcgctcgccgcgccgacc
ggaaaggccgcctcccggctccaggagtcggtcaacgcccaggtcgcgaccctcgacgag
gatgaccgggcgcgcgtcgggacgctcacggcgacgacgctgcaccggctgctggggcca
cgcccgggcagcacgacccgcttccggcacgaccgggaccgccgcctgccgcacgacgtc
gtcgtggtcgacgagtcctccatggtgtcgttgccgctcatggcccggctggtggaggcg
ctccggccggacgcccggctcgttctcgtcggtgaccccgaccagctcgccagcgtcgag
gcgggtgccgtgctgggcgacctcgtggcgtccctgcacgggcgcgcggtggtgcggctc
acccagacccaccggttcggcgacgaccttgccgcactcgcggcggcggtccgcgcgggc
gacgccgacgccacgctggccctcctgaggacgggcggtgcgcacgtccgtctcacggcc
acggaggtcgacgcgccggcgccggacgacctggtcggcctgcgccacgacgtcgtcacc
gccggtcgggcgctggtcgcggccgctcgtgccggcgacgcggccgccgcgctcgcggcg
ctcgggcagcaccggctgctgctcgcccaccgggagggcccggccggcgtggcccgctgg
gcggcccaggcggaggcgtgggtcgaggccgccacggacgcgcgcgactcccgggagccg
tggccgttggggctgcctctgctcgtcacggagaacgacccgtcgagcgggttgtccaac
ggcgacaccggggtcgtggtccgggacctggtcggcaccgggacccgtgggccggcggcg
cacggaccggcaccgggcgatgccgtcgtcgtggcgttcggcgatcccgatcgtccgcac
ctggtgcggccgcaccggctccccgccgtgcagccggtgcacgcgatgacggtgcaccgg
gggcagggcagccagttcacgcgcgtgaccgtcctgctgccgcccgcgacgtcgccgctg
ctgacccgcgagctgctctacaccgccgtgacgcgcgcccgcgagtccgtgcacgtgatc
ggctcgcccgacgccgtgcgggcagccgtcgagcgacccgtccgacgtgcgagcggccta
cggcacccgctgtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CFI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (23)   
   Pfam (23)   
All databases (33)   

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