KEGG   Colletotrichum fioriniae: CFIO01_03139
Entry
CFIO01_03139      CDS       T04796                                 
Name
(GenBank) RNA recognition domain-containing protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03013  Nucleocytoplasmic transport
cfj03015  mRNA surveillance pathway
cfj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CFIO01_03139
  09122 Translation
   03013 Nucleocytoplasmic transport
    CFIO01_03139
   03015 mRNA surveillance pathway
    CFIO01_03139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfj03019]
    CFIO01_03139
   03041 Spliceosome [BR:cfj03041]
    CFIO01_03139
Messenger RNA biogenesis [BR:cfj03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     CFIO01_03139
Spliceosome [BR:cfj03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    CFIO01_03139
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-ProteinID: EXF82205
UniProt: A0A010R099
AA seq 190 aa
MQVRHRNTVERLDRPSAYYHNRNKRRRNDNRDAAREARDAEDEAATKNEPLPEDPLANAT
TLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQDALDCMKY
IGGTKLDERVIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDFDEGRGGLGRAIQMQRDRD
DRMGEYEESR
NT seq 573 nt   +upstreamnt  +downstreamnt
atgcaggttcggcacagaaacacagtagagcgcctcgacaggccgagcgcatactaccac
aaccggaacaagcgcaggaggaacgacaaccgcgacgccgcccgcgaagcccgcgacgcc
gaagacgaggccgccaccaagaacgagcccctccccgaggaccccctcgccaacgcgacg
acgctctacgtcggcaacctctccttctacaccaccgaggagcaggtctacgagctcttt
tcaaagtgcggcgagatcaagcgtctcgtcatgggcctcgatcgcttcaacaagacaccc
tgcggcttctgcttcgtcgagtactacacccaccaggacgccctcgattgcatgaagtac
attggcggcaccaagctcgacgagcgcgtcatccgcaccgatctcgacccgggcttcgag
gaggggagacagtacggtcgcggaaagagcggtggacaggtgcgcgatgagtatcgtgag
gactttgacgagggacgtggtgggcttggtagggcgattcagatgcaaagggaccgggat
gatcgaatgggcgagtatgaggagtcgcgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system