KEGG   Colletotrichum fioriniae: CFIO01_10810
Entry
CFIO01_10810      CDS       T04796                                 
Name
(GenBank) TFIIH p62 subunit domain-containing protein
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03022  Basal transcription factors
cfj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CFIO01_10810
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFIO01_10810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfj03021]
    CFIO01_10810
   03400 DNA repair and recombination proteins [BR:cfj03400]
    CFIO01_10810
Transcription machinery [BR:cfj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CFIO01_10810
DNA repair and recombination proteins [BR:cfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CFIO01_10810
SSDB
Motif
Pfam: PH_TFIIH BSD
Other DBs
NCBI-ProteinID: EXF84744
UniProt: A0A010S298
AA seq 664 aa
MAIPSGRTAFKKKDGVLTLTPDQQSVIWTPAPGNGPPTVSLVIANISNLQQTPDSAAKVM
LKIFEKPPDATEQVPYLFHFTSPEARSEANAIKDLLSRLLADIRSGDPNVPKPSGNSTPN
AANGANGASGGGAGAGGGSSMAFASSANAKPNSARWFDDAQLKGDIELQQSLMKKDRTLH
QTYMDARATKPESISDAAFNAQFWSTRTNLLRAHAIEVNQQKGAYNVLPAIKPRLENDVL
KLDITVEMVQLIMAQHPLVKRLYDENVPKVPESEFWSRFFLSKLFRTLKGDRITDERKEG
IKRDALFDAHDASENTTMFQRKSMAQSVPHIIDVHGNEENQGGFRSGNQKDVEMRPRKNV
PIVNTLNSLSERMLANVAPSDRDGGVEAEEDSTWAEIALRDLRGDAKENKIILNIKEQNR
FFAKKDEAKSANALAFAKQNPSDVLFDIQTDLETIETDGAGGLNLRAGIGIVDDSDSDDD
AAGGGGGTRRPPHVGSRAARKAAGDDIMKGIRQRRAQKYGDTAADESRPMGLPVEVAERC
QLTHATTVEFLHQFWNAFLSGDPDRANELQYLVESLKRSAERIHAVADEAEKTRDDIIRA
KKKEIMDHYKATGKKIRGWRPEHEKGGRKAVLAIMQPTLEALKRAQGDYQRALAAEGVQL
STEA
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggcgataccgtcaggtcgtacggccttcaagaagaaggatggtgtcttgaccttgacg
ccggatcagcagtccgtcatttggactccagcacccgggaatggcccgcctacggtctcc
ctggtgattgccaatatctcaaacttgcaacaaacaccagacagcgcagccaaggtcatg
ctcaagatctttgagaagcctccagatgcaacagaacaagtgccgtacctcttccacttc
acatcaccagaagccaggtccgaggccaacgccatcaaggacctgctctcgaggctgttg
gccgatatccgctccggcgatcccaacgtccccaaaccctccggcaactcaaccccgaac
gcggccaacggcgcaaatggtgccagtggtggtggcgctggcgccggcggcggctcgtcc
atggcgtttgccagctccgccaacgcgaagcccaacagcgcgcgctggttcgacgacgcc
cagctcaagggcgatattgagctgcagcagtcccttatgaagaaggaccgcactctgcac
cagacgtacatggatgcgcgcgcgaccaagcccgagtcgatatcggacgcggccttcaac
gcgcagttctggtcgacgcgcacaaacttgctgcgtgcccacgccatcgaggtgaaccag
caaaagggcgcgtacaatgtcctccccgcgataaagccacggctggagaacgacgtgctg
aagctcgacatcaccgtcgagatggttcagctcatcatggcgcagcacccgctcgtcaag
cggctctacgacgaaaacgtgcccaaggtccccgagagcgagttctggtcccgcttcttt
ctcagcaagcttttccgcacgctgaagggagacaggatcacggacgagagaaaggaggga
atcaagcgcgacgcgctcttcgacgcccacgacgccagcgagaacacgacaatgttccag
cgcaagagcatggcgcagagcgtgccgcacatcattgacgtccacggcaatgaggagaac
cagggcggcttccgcagcggaaaccaaaaggacgtcgagatgcggccgcgcaagaacgtg
cccattgtcaacaccctcaacagtctcagcgagcgtatgctcgccaacgtggccccctca
gatcgcgatggcggcgtcgaggccgaagaggactcaacgtgggcggagattgccctccgc
gacctgcgcggcgacgcaaaggagaacaagatcatactcaacatcaaggagcagaaccgt
ttctttgcgaaaaaggacgaggcaaagtccgcaaacgccctcgcctttgcaaagcagaac
ccctcggacgtcctctttgacatccagaccgacctcgagacgattgagacggatggtgcg
ggcggcctcaacctccgcgcgggcatcggcatcgtcgacgacagcgacagtgacgacgac
gccgccggaggaggaggaggaacgcggcgcccgccccacgtcggctcccgcgccgcgcgc
aaagccgcgggcgacgacatcatgaagggcatccggcagcgccgcgcgcaaaagtacggc
gacacggcggcggacgagtcccgccccatgggcctgcccgtcgaggtcgcggagcggtgc
cagctgacgcacgccacgacggtcgagttcctgcaccagttctggaacgccttcttgtcg
ggcgacccggaccgcgccaacgagctgcagtacctcgtcgagtccctcaagcgctcggcc
gagcgcatccacgccgtcgccgacgaggcggagaagacgcgcgacgacatcatccgggcc
aagaagaaggagattatggatcactacaaggcgacggggaagaagattcgcgggtggcgg
cccgagcacgaaaagggcgggaggaaggccgtgttggcgattatgcagcccacgctcgag
gcgttgaagagggcgcagggggattatcagcgggctcttgctgctgaaggggttcagctt
tctactgaggcttga

DBGET integrated database retrieval system