KEGG   Colletotrichum fioriniae: CFIO01_11981
Entry
CFIO01_11981      CDS       T04796                                 
Name
(GenBank) endonuclease/Exonuclease/phosphatase
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFIO01_11981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfj03019]
    CFIO01_11981
Enzymes [BR:cfj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     CFIO01_11981
Messenger RNA biogenesis [BR:cfj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CFIO01_11981
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CFIO01_11981
SSDB
Motif
Pfam: Exo_endo_phos LRR_4 LRR_8 LRR_1
Other DBs
NCBI-ProteinID: EXF81174
UniProt: A0A010RSX7
AA seq 765 aa
MADGTRYLDHPVGDLYLNSLIPKETAADAILLNTLLRQFTAKDSNTPIPSNPIPRANLLG
MFSQNHQQGPNSRINGGHGGRGIPMLYNYQQQQQQHHQTHLQHHQAAQAEHAAHNGNGGV
MGHHSAFSSGVMGNSSPYSSNAMQNGQGGATRGGQAQQITEHWAEQLRLYEESKQAHRAM
TEQNQPHYYARLKASENRGIAGPPPSSGKNGDDDADDRRRPYSVEKNRERQNWHNMDLSG
QGLRNLAPALFRYQFLHDLFIASNRLQSLPPAIGQLRQLRYLNMSFNQIKILPPELGMCT
YLNQLLLFDNQIQTLPFELGSLHLLDVLGIEGNPIDPDMKQEIMEKGTKSLINLLKEQAP
IPMPPNPRKLITVQEDVSPTLEKVRVFSWNVLCDKYATPQTYGYTPTGALNWEYRKDCIF
SELREKDADLLCLQEISTEAFKEEFSPELAQMDYKGVHWPKTRAKTMAEKDAQGVDGCAT
FYKASKWILLDKQVIEFAAIAINRPDMKNQHDVFNRVMPKDNIAVVVFLESRATGARIIL
VNGHLAWESVLADVKLIQTGILMEQVTKFAEKYVRWPALKDKKPIVFSATGKDGEEPPPP
AKEPGPTQEYRNNTDIPLLVCGDFNSTGDSSVYELLSMGRVPPNHQELSSFQYGSFTRDG
IEHPFSLRDAYAHIKNTPDEMPFTNYTPGFSDVIDYLWYSTNTLEVVDLLGPPDAEYLKR
MPAFPNYHFPADHIQIMAEFVIKARKDKKSPHPEPDFGSGSGQGR
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggccgatggtactcgctatctggaccaccctgtcggagatctctacctcaactctctc
ataccgaaagaaaccgccgccgacgccatactcttgaacacgctcctgcgccaattcact
gccaaagactcgaatacacctataccatccaatccgatcccacgggccaatctgctaggg
atgttctcccagaatcatcagcagggccccaactcccgcattaatgggggccacggcggc
cggggtatcccaatgctgtacaactaccaacaacaacaacagcaacaccaccagactcac
ctccagcaccaccaagctgcccaggctgagcatgctgcgcacaatggcaatggaggtgta
atgggtcaccactcggccttctcctctggcgtcatggggaattctagtccgtatagcagc
aatgctatgcagaatgggcaaggaggagccacgcgaggaggacaagcacaacagatcacc
gaacactgggcggagcagctccgactctacgaggagtccaagcaagcccaccgtgccatg
accgaacaaaaccagccgcactactacgccagactaaaggcttcagaaaaccgcggcatt
gccgggcctccaccatcttcgggcaagaacggcgacgacgatgcggacgataggagacga
ccatacagcgtagaaaagaatagggaacggcagaactggcacaatatggaccttagcggc
caaggattgcgtaacctcgcacccgctcttttccgctaccagttcctccacgacctcttc
atcgcctccaacaggcttcagagtctccctcccgcgatcggccagctgcgccagctccga
tacctcaacatgtcgttcaaccagatcaagatccttcccccagaactcggcatgtgcacc
tacctcaaccagcttctcctcttcgacaaccaaatccagacactccccttcgagctcggc
tctctacacttgctggacgttctcggcatcgagggcaaccccatcgacccggatatgaaa
caggaaatcatggagaagggcaccaagagcctgatcaacctcctcaaggagcaagccccg
attccgatgccacccaacccgagaaagctcattactgtacaagaagatgtttcgcctact
ttggaaaaggtcagagtcttttcttggaacgtcttatgcgacaagtacgcgacaccgcaa
acgtacggatatacgcccacgggcgcattgaactgggaataccggaaggactgcattttc
agcgaattgagagagaaggacgcggatctgttgtgcctgcaggagatctcgacggaggcg
ttcaaggaagagttcagcccggaattggcacagatggattacaagggtgtacactggccc
aagactcgcgcaaagaccatggcggagaaggacgcacagggtgtggatggttgcgctact
ttctacaaggccagcaagtggattttgctcgacaagcaggtcatcgaattcgccgccatc
gccatcaatcggccggacatgaagaatcaacacgacgtcttcaaccgtgttatgccaaag
gacaacatcgccgttgtggtattcctcgaaagccgagctaccggcgcgcgcatcatccta
gtcaacggacacttggcctgggagtctgtgctggcggacgtcaagttaatccagacgggt
attctgatggagcaagtcacaaagttcgccgagaagtacgttcgctggccggcactcaag
gacaagaagcccatcgtcttctctgctactggcaaagacggggaggagccaccaccgccg
gctaaggaaccggggcccacccaagagtaccgtaacaataccgacattcccctgctcgtg
tgcggtgatttcaactcaaccggagacagctcggtctacgagctattgtctatgggacgt
gttcctcccaaccaccaagagctgtcatccttccagtatggtagcttcacgagggatggt
attgagcatcccttcagcttgcgggatgcatacgcccatatcaagaacactcccgatgag
atgcccttcaccaactacacgcctggcttctcagatgtcattgattatctgtggtactca
accaacacattggaagtggtggatctgcttggcccgcccgatgctgaatatctcaagcgg
atgccggcgttccccaactaccacttcccggccgaccacatccagattatggccgaattc
gtcatcaaagctagaaaggataagaagtcgccgcacccggaaccggattttggatcagga
agcgggcaaggccggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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