KEGG   Colletotrichum fioriniae: CFIO01_12547
Entry
CFIO01_12547      CDS       T04796                                 
Name
(GenBank) ATP dependent DNA ligase domain-containing protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CFIO01_12547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfj03400]
    CFIO01_12547
Enzymes [BR:cfj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CFIO01_12547
DNA repair and recombination proteins [BR:cfj03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     CFIO01_12547
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N EAD7
Other DBs
NCBI-ProteinID: EXF78369
UniProt: A0A010RKH0
AA seq 1019 aa
MPVSFVLVCDLLEQAHKQCKTGDKNLKQRVCNWFTLHRQLIDEPETDASALLSTLLPDKR
TDRVYCIQADTLANIIGRTFGLGTSRLQELRRYKEAGRGEDLADCVERVFRETPPPICVG
KDVVTVEEIDSTLNKLAALCRFSSPVVRASQPNPSSSNRQELLGHLYLRLQAREAKWLTR
LILKNFQPVMLDPAHLYHCYDPLLPMILMVQDNFDAALSLLGNLKKDPSFLNGSGNQKRR
DLTRHLTPVLGTKVGRPFWLKGRSIKHCMKLIQGRMSCEKKMDGEYCQIHVNLSKGFKCI
QIFSKSGKDSTKDRAALHGAIRDSLNIGKPNCKFSKGCILEGELVVYSDLEKKILPFHKI
RKYVTRSGSYLNTEADSQRYDYEHLMIIYFDVLLIDGESLLGTNQNERFERLTELINRRE
GHADLVERQVIDLNDRLGAHYLRRAFAESITAREEGLVLKPDEPYFDFSESRRSFAGCPI
KLKKEYIGGFGDVGDFAVVAARYDADKAKCYGIPNLKWTHFYLGCLENKEDVERCQAQPV
FTVVHQVELKETLLKTVSTYGNPMPVSFDENDALILHLSPGVAQQKMPTIVFTEPLVFDV
RCFSFDKERNTNFWQPRFPQVSKVHFDRSFIDTISFSELQAVAEEATTTPAMEDSQEMLD
WIARLERADPRGVPVDAISQSTTGSLMTPSRTSSVRPSTSPAPNFSISPTKPLQRLPALV
EAPEPTLITPPTSSDKAADMDLIAEDKTASEAAHSPRASKRGPEGVDATPQKRPRVPSEP
GTAGRELPPPTRRPLGDISANQTALSPQASQTRPATAKHVVMDQKAASPVIPALHGPGKP
MAGSAAEIFEPRRQSVPDSSSTRVKPKCQHAGDNCLFADTMILLAPCIAYQPWVTENLLP
LHGIHEWTADPQDWTASSDTTASSFHSIIPASTSATNRSKKKRPRKICFVEHNRREATKT
LMRRLDSNPVYTTSGRREYVEVYDWRLLEDVTAMEKVLKGSKPSKEQLDPKRKWWVGLA
NT seq 3060 nt   +upstreamnt  +downstreamnt
atgcctgtttcctttgttctcgtctgcgatcttctggagcaagcccacaaacagtgtaaa
accggcgataagaatctgaagcaacgcgtatgcaactggttcacgctgcaccgccaactt
atcgatgagcctgagacagatgcctctgctctgctctcgactctcctcccggacaagcgc
accgatcgtgtatactgtatccaggccgacacgctagccaatatcattggccgcaccttt
ggcctcggaacgtcacgtctccaagaattgcgtcgatacaaagaggctggtcgcggcgag
gatctggctgattgtgtggagagggtcttcagggaaacgcctcctcctatctgcgtaggg
aaagatgtcgtaactgtggaagaaatcgactcaaccttgaacaaactcgctgccttgtgt
aggttcagttcgcccgttgttcgggcctcacagcccaatcccagcagcagcaaccgtcaa
gaacttcttggccatctataccttcgcctgcaagcgcgagaggcgaaatggctcactcgc
ctgatactcaagaacttccagccagtgatgctggatcctgctcatctctaccattgttac
gaccccttactgcccatgatactcatggttcaggataattttgatgcggccttgtctctg
ctcggaaatctgaagaaggacccctcgttcctcaatggctcggggaaccaaaagcggaga
gatctaacgcggcacctgacgcccgtcttgggcaccaaggttggaagaccgttctggctg
aaagggcgaagcatcaagcattgcatgaagctcatccaaggccgtatgagctgcgagaag
aaaatggatggcgagtattgccagatccacgtaaatttgagcaaggggttcaaatgcatc
caaatcttttccaagagtggcaaggatagcaccaaagaccgcgctgcgttacacggagct
atacgcgactctctcaacattgggaaaccgaattgcaagttctccaagggatgtattctt
gagggcgagctcgtcgtctacagtgacttggagaagaagattctgccgttccataagata
cgcaaatacgtcacaaggtcgggcagctatctgaatacggaagcagactcgcagcgctac
gactatgaacacttaatgattatctacttcgacgttttactcatcgatggggaatctctg
cttggtaccaaccagaacgagcgcttcgagcgactgactgagttaattaaccgccgagag
ggtcatgccgatcttgtggaacgccaagtcattgacctcaatgatagactgggagcgcat
tatctacgacgagcctttgctgagtccatcactgcccgggaggaaggtctggtgctgaag
ccagacgaaccctatttcgacttcagcgagagtcgccgctcctttgctggttgccccatc
aagctgaagaaagagtatatcggaggctttggcgatgtgggcgactttgctgtggttgca
gcgcggtacgatgcagacaaggcaaagtgctacggcattcccaacctgaagtggacacac
ttctacctcggctgcctcgagaacaaggaggatgtagagaggtgtcaggcccaacctgtg
ttcacagtggttcaccaggtggaactcaaagagaccctcctcaagaccgtttcgacttac
ggaaacccgatgccagtgtcttttgacgagaatgatgccttgatccttcatctttcacca
ggcgtcgctcagcaaaagatgcccaccattgtcttcaccgagccgctggtctttgatgtc
cgttgtttctcattcgataaggagagaaacaccaacttctggcagccgaggttccctcag
gtatcaaaggtgcattttgaccgatccttcatcgacacaatctctttctccgagttgcag
gccgtggctgaagaagcaaccacgacaccggctatggaagacagccaggaaatgctggac
tggattgctagactggaaagagcagaccctcgtggtgttcctgttgatgccattagtcag
tctactacaggttctctcatgacgccatctcgtacttcttccgtccgaccttcaacttcg
ccagcgccgaatttttccataagccctaccaaacctctccaacgattaccagcattggta
gaagccccagagccaactctcatcactcctccaacttcgtcagacaaggctgcagatatg
gacctcatcgctgaagataagactgccagcgaagcagcacactcgccaagggccagcaaa
cggggtcccgagggggtggacgcgactccgcagaagcgaccaagggttccttccgaacct
ggcaccgccggtcgagagctgcctccgccaacacgtcgaccgctcggggatatcagtgcc
aatcagacggctctctctcctcaggcgtcccaaacacggccagcgacagcaaagcacgtc
gtgatggaccagaaagcggctagtccagtcattcccgctttgcatgggccgggcaaaccg
atggcaggatctgcagcagaaatatttgaaccgcgtcgtcagagcgtgccagactcctcg
tctacacgagtgaagcccaagtgccaacatgcaggcgacaattgtctatttgcagacacg
atgatcttactcgcaccctgcatcgcataccaaccctgggtcaccgaaaatctcctccct
ctgcacggcatccacgaatggaccgcggatccgcaggactggacagcatcctccgacaca
accgcatcatcgttccattccataatacccgcatctacctcagccacgaaccgctccaaa
aaaaagcggccccgaaaaatctgtttcgtcgaacacaaccgcagagaagcaacaaagacc
ctaatgagacgtctggatagcaatccggtgtacacaacgagtggcaggcgcgagtatgtt
gaggtgtatgactggcgtcttttggaagatgtcacagcaatggaaaaggtgctcaaggga
tccaagccgtccaaggagcaactggaccccaagaggaagtggtgggttggattggcttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (42)   

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