KEGG T05005: BJL90

Clostridium formicaceticum: BJL90_16900

Entry

BJL90_16900       CDS       T05005

Name

(GenBank) RNA pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

cfm Clostridium formicaceticum

Brite

KEGG Orthology (KO) [BR:cfm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cfm03009]
    BJL90_16900
Enzymes [BR:cfm01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     BJL90_16900
Ribosome biogenesis [BR:cfm03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BJL90_16900

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 DUF234 ThiS

Other DBs

NCBI-ProteinID:

AOY77380

UniProt:

A0A1D9FQA5

Position

complement(3621948..3622868)

AA seq 306 aa
MDREVFFVAEEEEGTRLDLYISQQYEDLSRSYIQKLIKDQLVKVNTKYEKNKYIVKEGDE
IEVLVPPPRALDVKPQNIPIDIVYEDEDVIIVNKPQDMVVHPAVGNYENTLVNALLYHCE
GKLSSINGIIRPGIVHRIDKDTSGLLMVAKNNVAHRELAEQLKEHSITRRYHAIVLGNIK
ENKATIDAPIGRHPTQRLKMAVVENGRNAITHIQVLEKFKGYTYIEAKLETGRTHQIRVH
LSYIKHPLLGDEVYGGKTTKFNLVGQVLHAKVLGFIHPSKKEYMEFEAPLPSSFEKVLRF
MRSNAL

NT seq 921 nt +upstreamnt +downstreamnt
ttggacagagaagtgttttttgtagcagaggaagaagaaggcactagattagatctatat
atttcccagcaatacgaagacttaagcagaagctacatacaaaaacttatcaaagatcag
ctggttaaggtaaatactaagtatgagaaaaataaatatatcgtaaaagagggggacgaa
atagaagtcttagtacctccacctagagcgttagatgttaagccacaaaatattcctatt
gatattgtttatgaagacgaggatgtaattattgtcaacaaaccacaagatatggtggta
caccctgctgtcggcaactatgaaaacactttagtaaatgccctgctataccattgtgaa
ggaaaattatcttctatcaatggtatcattcgtcccggcattgtacaccgtattgataaa
gatacttcaggtttattaatggtggcaaaaaacaacgttgcccatagagagttagcagag
caattaaaggagcattccatcactagaagatatcatgctattgttttaggaaacataaaa
gaaaacaaagctaccatagatgcacccattggcaggcatcctacacaacgtcttaaaatg
gcagtggtagagaatggtagaaatgctattacgcatattcaagtgttggaaaagtttaaa
ggttatacatatattgaagcaaaactagagacaggcagaacccatcaaattagagtacat
ttatcttatataaaacatcccttattaggggatgaggtttatggcggtaagacgacaaaa
tttaacttggttgggcaggttcttcatgcaaaggtgctgggatttattcatcctagtaaa
aaagagtatatggaatttgaagcacctttaccttctagctttgaaaaagtattgcgcttt
atgagaagtaatgctttataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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