KEGG   Camponotus floridanus (Florida carpenter ant): 105251913
Entry
105251913         CDS       T03919                                 
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
  KO
K04556  parkin [EC:2.3.2.31]
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo04120  Ubiquitin mediated proteolysis
cfo04137  Mitophagy - animal
cfo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105251913
   04120 Ubiquitin mediated proteolysis
    105251913
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    105251913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfo04131]
    105251913
   04121 Ubiquitin system [BR:cfo04121]
    105251913
   03029 Mitochondrial biogenesis [BR:cfo03029]
    105251913
Enzymes [BR:cfo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     105251913
Membrane trafficking [BR:cfo04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    105251913
  Aggrephagy
   Other aggrephagy associated proteins
    105251913
  Xenophagy
   Other xenophagy associated proteins
    105251913
Ubiquitin system [BR:cfo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    105251913
Mitochondrial biogenesis [BR:cfo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    105251913
SSDB
Motif
Pfam: zf-RING_14 zf-RING_12 ubiquitin IBR Rad60-SLD Rad60-SLD_2
Other DBs
NCBI-GeneID: 105251913
NCBI-ProteinID: XP_011257323
UniProt: E2AFR5
Position
Unknown
AA seq 498 aa
MSFWFNLVKDVFLRMLQLLSFSRRKISNSLSIYIKTNTGSTLSVELDPKWDIKNLKEIVA
PQMGIAPEDIKIIFAGKELHNSIIIEECDLGQQSILHAVRTPHKIVNKTRNTDLIEESIS
ETSDLNDSSGSKPMNETLMDLSLDESNLENLSLKEQQENRAHFYVYCSAPCKNVTAGKLR
VKCARCGSGAVTVDRDPQCWPDVLQPRRITVNCESDFCPVTSSMHKDETESQVSYAHFYF
KCAKHPSLGENDEAVPLYLVKPNLRNIPCLACTDIRETVLVFPCEAGHVTCLDCFREYCT
VRLHERRFEFDEEYYTLPCPAGCPNSYIREVHHFHLLGVEQYERYQRFSTEEHVLRAGGI
LCPRPDCGMGIIPPSIEDDRECRRIQCIGGCGYVFCRICLQGYHVGECESQMSDASTSVF
SSNYYSVDPLKANQATWDEASKKTIQTSTKPCPKCRTPTERDGGCMHMVCTRAGCGYHWC
WVCQTEWTRDCMGNHWFG
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgagcttctggtttaatttagtgaaagacgtatttctcagaatgttgcaattattgtcg
ttcagcagacgaaagatatcgaactctttaagcatatatattaaaacgaatacagggagc
acactctcggtcgaattagatccaaaatgggatataaaaaacttgaaggaaattgttgcg
cctcagatgggtatagcgccagaagatattaaaatcatatttgcaggtaaagaactgcat
aattcaattataatagaggaatgtgatttaggtcaacaaagtattttacacgcagtacgg
acaccacataaaatagttaataaaacgaggaatacagaccttatagaagaatctatatct
gaaacatctgacttgaatgacagtagtgggagcaaacctatgaacgagacacttatggat
ttatctttggatgaatcaaatcttgaaaatttatccctaaaagagcagcaggaaaatcga
gcgcatttttatgtatattgttcagcaccatgtaaaaatgtgacagcaggtaaactaaga
gtcaagtgtgcaagatgtggcagtggagctgtcactgttgatagagatcctcaatgctgg
ccagatgtattgcaaccaagaagaataactgtaaactgcgagagtgatttttgtcctgta
acctcaagcatgcataaagatgagacagagtctcaagtctcttatgcacatttttacttt
aaatgcgcaaaacatcccagtttaggagaaaacgacgaagctgtaccactttatcttgta
aagccaaatttaaggaatattccttgtctagcatgcacagatattagagaaactgtgtta
gtatttccatgtgaagctggtcatgtaacttgtcttgattgctttcgtgaatattgtaca
gtacgtttacacgagcgacgatttgaatttgatgaggaatattatactttaccatgtcct
gctggatgtcctaattcttatattcgtgaagtgcatcattttcatcttcttggtgtggaa
cagtatgaaagatatcagagatttagcacagaagaacatgttttacgtgctggtggtatt
ttatgtccaagaccagattgtggaatgggtatcataccaccttctatagaagatgataga
gaatgtcgcagaatccagtgcattggtggatgtggctatgttttttgtagaatctgttta
caaggatatcatgtaggagaatgcgagtcgcaaatgtcggacgcatctacaagtgttttt
tcttctaattattattcagtggatcctcttaaagctaaccaagctacatgggatgaagca
agtaaaaaaacaatacaaacatccacgaaaccttgtccaaaatgcagaactcctactgaa
agagatggaggctgcatgcatatggtatgtacaagagcaggatgtggttatcattggtgc
tgggtgtgtcagacagaatggactagagactgtatgggcaatcattggtttggataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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