KEGG   Camponotus floridanus (Florida carpenter ant): 105252644
Entry
105252644         CDS       T03919                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03018  RNA degradation
cfo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105252644
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105252644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfo03019]
    105252644
   03041 Spliceosome [BR:cfo03041]
    105252644
Messenger RNA biogenesis [BR:cfo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105252644
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105252644
Spliceosome [BR:cfo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105252644
SSDB
Motif
Pfam: LSM SM-ATX BPL_C LSM14 Hfq PP4R3
Other DBs
NCBI-GeneID: 105252644
NCBI-ProteinID: XP_011258435
UniProt: E2AI22
Position
Unknown
AA seq 91 aa
MATSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLQGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDT
NT seq 276 nt   +upstreamnt  +downstreamnt
atggctacctcggtgagcacgaatccatctacgttgttgcctttagaattagtcgataaa
tgtattggttctcgaatacatattattatgaaaaatgacaaggagattgtaggaactttg
caaggtttcgacgatttcgttaatatgttattggaggatgtaacagaaagcgaagcaact
cccgaaggtcgtagagtcaccaagttggatcaaattcttctcaatggcagcaacattact
atgctggtacctggtggtgagatgccagatacataa

DBGET integrated database retrieval system