KEGG   Camelus ferus (Wild Bactrian camel): 102507187
Entry
102507187         CDS       T02979                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
cfr  Camelus ferus (Wild Bactrian camel)
Pathway
cfr03013  Nucleocytoplasmic transport
cfr03015  mRNA surveillance pathway
cfr03040  Spliceosome
cfr05014  Amyotrophic lateral sclerosis
cfr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102507187 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102507187 (ALYREF)
   03015 mRNA surveillance pathway
    102507187 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102507187 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102507187 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfr03019]
    102507187 (ALYREF)
   03041 Spliceosome [BR:cfr03041]
    102507187 (ALYREF)
Messenger RNA biogenesis [BR:cfr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102507187 (ALYREF)
    TREX complex
     102507187 (ALYREF)
Spliceosome [BR:cfr03041]
 Complex C
  Other components
   EJC/TREX
    102507187 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102507187 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 102507187
NCBI-ProteinID: XP_032312422
UniProt: A0A8B8R388
Position
16:20566327..20570045
AA seq 256 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGARRGARGGSRGRGRGTGRSSKQQLSAE
ELDAQLDAYNARMDTS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggcggacaaaatggatatgtctctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcgggggcaggggccgcggccgggccggctcccagggcggccgtggcggc
ggagcgcaggccgccgcgcgagtgaaccgaggcggcgggcctatccggaaccggcctgct
atcgcccgcggcgcggcgggcggcggcggcagaaaccggccggcgccctacagcagaccg
aaacaactccctgacaaatggcaacacgacctattcgacagcggttttgggggtggtgcc
ggcgtggagaccggtgggaaactgctggtgtccaatctggattttggagtgtccgacgcc
gatattcaggagctctttgctgaattcgggactctgaagaaggcggctgtgcactacgac
cgctctggccgcagcttaggaacagcagacgtgcactttgagcggaaggcagacgcgcta
aaagctatgaaacagtacaacggcgtacccctggatggccgccccatgaacattcagctc
gtcacctcacagattgacacacagcggagacctgcacagagtgtaaacagaggcgggatg
actagaaaccgtggttccggaggctttggtggcggcggtgcccggagaggtgcacgtgga
ggcagccggggcagaggcagaggcaccggtcggagttcaaagcagcaactttctgcagag
gagctggatgcccagctggacgcctacaatgccagaatggacaccagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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