KEGG   Collimonas fungivorans: CFU_1141
Entry
CFU_1141          CDS       T01583                                 
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
cfu  Collimonas fungivorans
Pathway
cfu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CFU_1141 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfu03400]
    CFU_1141 (sbcB)
Enzymes [BR:cfu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     CFU_1141 (sbcB)
DNA repair and recombination proteins [BR:cfu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CFU_1141 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CFU_1141 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CFU_1141 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AEK60973
UniProt: G0AJ39
Position
complement(1331897..1333330)
AA seq 477 aa
MSTHTFLWHDYETFGVQPRRDRPAQFAAIRTDAELNEIGEPIMLYCQPANDFLPDPQSCL
ITGITPQQCLERGIPEYQFAAQIEKAFSEAGTIGVGYNTIRFDDEVTRFLFWRNLIDPYA
REWQNQCGRWDILDVVRTAYALRPEGIQWPVNDEGRPSFRLELLTKANGLSHEAAHDALS
DVRATIALARLIRQHQPKLFDFCLALHKKDRAGAEIGLPTPRPFLHISGMFPAEQGCLAV
MWPLGVHPTNKNEILAWDLAFDPSELFSLDADTVRTRLFSKSADLPEGVTRLPLKSVHLN
KSPMVINKLQTLSADMTTRWGIDIPLALRHAEIAAQAPDLSGLWRQVFQRPEEAASDVDE
DLYGGFVGNNDRRKLNDLRAMPPQKLAAARVSFDDQRLEELAFRYRARNFPDTLTPEEQE
RWDEHRAARLFDGEGKARTVDMLFEEIDQLSETADERGEEILGALYDYAEMIAPARE
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtccacgcataccttcctctggcacgactacgaaactttcggcgtccagccgcgacgc
gaccgcccggcccaatttgcggcgatccgcacggatgccgaactgaatgagatcggcgag
ccgatcatgttgtattgccaaccagcaaatgactttctgccggatccgcaatcctgcctg
atcaccggcatcacgccgcagcaatgcctggagcgaggtattcccgaataccagttcgcg
gcccagatcgaaaaagcgttttccgaagccggcacaatcggcgtcggctacaacacgatc
cgcttcgacgacgaggtcacccgtttcctgttctggcgcaacctgatcgatccctatgcg
cgcgaatggcagaaccagtgcggccgctgggatatcctggacgtggtgcgcaccgcctat
gccttgcggccggagggcatccaatggccggtcaacgacgaaggacggcccagtttccgc
cttgaactgctgaccaaggccaacggcctcagccacgaagcggcgcatgacgcgctgtcc
gacgtgcgggcgaccattgcgctggcgcgcctgatccggcaacaccagccgaaactgttc
gatttttgcctggcgctgcacaagaaagaccgcgccggcgctgaaatcggcttgccgacg
ccgcggccgttcctgcatatttccggcatgttcccggccgagcagggctgcctggccgtt
atgtggccgctcggcgtgcatcccaccaacaagaacgaaatactggcctgggacctggcg
ttcgatcccagcgagctgttttccctggatgccgataccgtgcgcacccggctgttcagc
aagtccgccgacctgccggaaggcgtaacgcgcctgcccttgaaatcggtgcacctgaac
aaatcgccgatggtgatcaacaagctgcaaaccctctcggccgacatgaccacgcgctgg
ggtatagatatcccgctggcgttgcgccatgcggaaattgcagcgcaagcccctgacctc
agcggcctgtggcgccaggtattccagcgtccggaggaagcggcaagcgatgtcgatgaa
gacttgtacggcggttttgtcggcaacaacgacaggcgcaagctaaatgacttgcgcgcc
atgccgccgcaaaaactggcggcggcccgcgtcagttttgacgaccagcgcctggaagaa
ctggccttccgctaccgcgcccgcaatttccccgacaccctgacaccagaagaacaggaa
cgttgggacgaacaccgcgccgcccgcctgttcgacggcgaaggcaaggcgcgcacggtc
gacatgctgtttgaggagatagaccagctgtcggaaacggccgacgagcgcggcgaagaa
atcctcggcgcgctgtatgactatgcagagatgatcgcgccggcgcgcgaatag

DBGET integrated database retrieval system