KEGG   Collimonas fungivorans: CFU_3556
Entry
CFU_3556          CDS       T01583                                 
Symbol
lpd
Name
(GenBank) Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
cfu  Collimonas fungivorans
Pathway
cfu00010  Glycolysis / Gluconeogenesis
cfu00020  Citrate cycle (TCA cycle)
cfu00260  Glycine, serine and threonine metabolism
cfu00280  Valine, leucine and isoleucine degradation
cfu00310  Lysine degradation
cfu00380  Tryptophan metabolism
cfu00620  Pyruvate metabolism
cfu00630  Glyoxylate and dicarboxylate metabolism
cfu00640  Propanoate metabolism
cfu00785  Lipoic acid metabolism
cfu01100  Metabolic pathways
cfu01110  Biosynthesis of secondary metabolites
cfu01120  Microbial metabolism in diverse environments
cfu01200  Carbon metabolism
cfu01210  2-Oxocarboxylic acid metabolism
cfu01240  Biosynthesis of cofactors
Module
cfu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
cfu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cfu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
cfu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:cfu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CFU_3556 (lpd)
   00020 Citrate cycle (TCA cycle)
    CFU_3556 (lpd)
   00620 Pyruvate metabolism
    CFU_3556 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    CFU_3556 (lpd)
   00640 Propanoate metabolism
    CFU_3556 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CFU_3556 (lpd)
   00280 Valine, leucine and isoleucine degradation
    CFU_3556 (lpd)
   00310 Lysine degradation
    CFU_3556 (lpd)
   00380 Tryptophan metabolism
    CFU_3556 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CFU_3556 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cfu04147]
    CFU_3556 (lpd)
Enzymes [BR:cfu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CFU_3556 (lpd)
Exosome [BR:cfu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CFU_3556 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Biotin_lipoyl Pyr_redox_dim Pyr_redox Biotin_lipoyl_2 FAD_oxidored Pyr_redox_3 AlaDh_PNT_C NAD_binding_8 PYNP_C GCV_H GIDA RnfC_N HI0933_like FAD_binding_2 Thi4 DUF4813 DAO 3HCDH_N FAD_binding_3
Other DBs
NCBI-ProteinID: AEK63380
UniProt: G0ADB8
Position
complement(4146083..4148179)
AA seq 698 aa
MSMVEVKVPDIGDVKEVEVIELMVKVGDTVKVDQSLITVESDKASMEIPSSQAGVIKEIK
VKVGDKVSEGSLILVVEAAGAAAAAPAAAAPAPAATAAPAAAAAPAAAGVASTIEIKVPD
IGDVKEVDVIELMVKVGDSVKVDQSLITVESDKASMEIPSSQAGVIKEVKVKVGDKVSEG
SVIVLLETTGAAAAAPAGAAPAPAAAPAAPAVAAPAAVRFAGKVDIECDTMVLGAGPGGY
TAAFRAADLGQSVVMIERYPSLGGVCLNVGCIPSKALLHAAKVITEAEEMAHFGVKMSAP
EIDIDALRGWKESVIKKLTGGLSGLSKARKVQVLTGKGEFSSANTITVATADGPKVVGFK
NAIIAAGSSVARIPGFPYDDPRLIDSTGALELRQIPKKLLVIGGGIIGLEMACVYDALGS
KVTVVEFADGLIPAADRDIVKPLQKRIEKRYEAIYLKTKVTKLEALKEGLRATFEGADSS
SPAAPEPQLYDMVLVAVGRRPNGKDIAAEKAGVIVNERGFIPANKQQRTNVSHIFAIGDI
CGDPMLAHKATNEAKVAAEVIAGHKVEFDAMTIPSVAYTDPEIAWMGLTETEAKAKGIPF
EKANFPWAASGRALAMGRDDGMTKLLWDPSTKRIIGAGIVGVNAGELLAETVLAMEMGAD
LEDLALTIHAHPTLSETPMFAAEMGLGTITDLFIPKKK
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgagtatggttgaagtcaaggtcccggatatcggcgacgtcaaggaagtggaagtcatc
gaactgatggtcaaggtaggcgataccgtcaaggtcgaccagtcgttgatcaccgtcgaa
tcggacaaggccagcatggaaattccgtcgagccaggccggcgtcatcaaggaaatcaag
gtcaaggtaggcgacaaggtcagcgaaggttcgctgatcctggtggtggaagccgccggc
gccgccgcggcagctccggcagcggcagctccggcgccggcagcaaccgctgcgccagcg
gccgccgcagccccggccgccgccggcgttgccagcaccatcgaaatcaaagtgccggat
atcggcgacgtcaaggaagtcgatgtcatcgagctgatggtcaaggtaggcgacagcgtc
aaggtcgaccagtcgctgatcaccgtcgaatcggacaaggccagcatggaaattccttcc
agccaggccggcgtcatcaaggaagtgaaagtcaaggtaggcgacaaggtcagcgaaggt
tcggtgatcgtgctgctggaaaccaccggcgccgctgcagccgcaccggctggcgcagct
cctgctccggcagctgcgccagcagcgccagccgtggcggctccggcggccgtccgtttc
gccggcaaggtcgacatcgaatgcgacaccatggtgctgggcgccggccccggcggctat
accgctgccttccgcgctgccgacctcggccaaagcgtggtgatgatcgagcgctaccca
agcctcggcggggtttgcctgaacgtcggctgtatcccgtccaaggcgctgctgcatgcg
gccaaggtgattaccgaagcggaagaaatggcgcatttcggcgtcaagatgtcggcgccg
gaaatcgatatcgacgccttgcgcggctggaaggaaagcgtcatcaagaaactgaccggc
ggtttgtccggcctgtccaaggcgcgcaaagtgcaggtgctgaccggcaagggcgaattc
agctcggccaatacgattacggtagccactgccgacggcccgaaagtggtcggcttcaag
aacgcgatcattgccgccggttcctcggtggcccgcattcctggcttcccttacgacgat
ccgcgcctgatcgactccaccggcgcgctggagctgcgccagattccgaagaaactgctg
gtcatcggcggcggcatcatcggcctcgaaatggcttgcgtgtatgacgcgctcggctcc
aaggtcacggtggtcgaatttgccgacggcctgattcctgcggccgaccgcgacattgtc
aagccgctgcagaaacgcatcgaaaaacgctacgaagcgatttacctgaaaaccaaggtg
accaagctggaagctctgaaagaaggtctgcgcgcaacgtttgaaggcgccgacagcagc
tctcccgcggcgccggaaccgcaactgtacgacatggtgctggtggcggtggggcgtcgt
cctaacggcaaggacatcgccgccgagaaggccggcgtgatcgtcaacgagcgcggtttc
atcccggccaacaagcagcagcgcaccaacgtctcgcacatcttcgccatcggcgatatc
tgcggcgatccgatgctggcccacaaagccaccaacgaagccaaggtggccgccgaagtg
atcgccggccacaaggtcgagttcgacgccatgacgattccttcggtggcctacactgat
ccggaaatcgcgtggatgggtttgactgaaaccgaagccaaggccaagggtattcctttc
gaaaaagccaatttcccgtgggcggcaagcggccgtgcgctggcgatggggcgcgacgac
ggcatgaccaagctgttgtgggatcctagcaccaagcgcatcatcggcgccggcattgtc
ggcgtgaatgccggcgagctgctggcggaaaccgtgctggcgatggaaatgggcgccgac
ctggaagatctggcgctgaccatccatgcgcatccgaccttgtcggagacgccgatgttt
gcggcggagatgggcctgggtacgattactgacctgttcattccaaagaaaaaataa

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