KEGG   Cystobacter fuscus: CYFUS_002825
Entry
CYFUS_002825      CDS       T05065                                 
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
cfus  Cystobacter fuscus
Pathway
cfus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CYFUS_002825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfus03019]
    CYFUS_002825
Enzymes [BR:cfus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     CYFUS_002825
Messenger RNA biogenesis [BR:cfus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CYFUS_002825
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ATB37403
UniProt: A0A250J1G8
Position
3450118..3451791
AA seq 557 aa
MLQPVPDDAREAVAFEAGSKDPLEELPVPEPEEVSFPMPAFTAPSAEDTIPDTDFLPEPQ
LSGKPAEIDPDKLDPDALKVIHRLHSHGHEAYLVGGCVRDLSLGRTPKDFDIATSAHPGE
VRAIFRNCRLIGRRFRLAHIYFKGGKIIEVSTFRANPTELVDAPSESGEEEGGEAEESQN
PDLLITHDNVFGTAEQDARRRDFTINGLFYDVVEGRIIDYVRGRRDLDEHYIRTIGDPEI
RMREDPVRILRAVRFASKLGLDIESRTYAAMEGAVEDLPRCAPARLLEETFRLIRGGVAA
PSLRLLDALDALKILLPPVAAYFKEQGRRGQETFYSFAEALDRRVASGELLDDAILLAAL
LVPIAQASPVVESLDAAGRPSVSQAIEDLLAEFVQTARLPRRIAERCRLLLIAQRTLSGE
RRKKTGAFRRHPLFADALVVFEISVEATSRHRDALEAWKRGDVPSSRPSTEGSAAEGDAP
RKRRRRRRRGGTRNKPGTTEGASTAPAAAGASESTATEASEDALDEASGDEESDDTFDSS
DADDDSGEDAESASDEG
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgctccagcccgtgcccgatgacgcgcgcgaggctgtggccttcgaggccgggtccaag
gaccccctcgaggagctaccggtccccgagcccgaggaggtttccttccccatgcccgcc
ttcacggcgccgtcggccgaggacacgatcccggacacggatttccttcccgaaccccag
ctctccggcaagcccgcggagatcgatccggacaagctcgatccggatgccctcaaggtc
atccaccgcctgcactcccatggccatgaggcctacctcgtggggggatgcgtgcgcgac
ttgtcgctgggccgcacgcccaaggacttcgacatcgccacgagcgcccacccgggtgag
gtgcgcgccatcttccgcaactgccggctcatcggccgccgcttccggctcgcccacatc
tacttcaagggcgggaagatcatcgaggtgtccaccttccgcgccaaccccaccgaactc
gtcgacgctccgtccgagagcggcgaggaggagggcggcgaggccgaggagtcgcagaac
ccggatctgctcatcacccacgacaacgtcttcggcaccgccgagcaggacgcgcgccgc
cgcgacttcaccatcaacggcctcttctacgacgtcgtcgagggccgcatcatcgactac
gtgcgcggtcggcgggatctcgacgagcactacatccgcaccatcggggatccggagatc
cgcatgcgcgaggatccggtgcgcatcctgcgcgccgtgcgcttcgcctccaagctgggc
ctggacatcgagtcgcgcacctatgccgccatggaaggggccgtcgaggatctcccccgc
tgcgccccggcgcgtctgctcgaggagaccttccgcctcatccgcggcggcgtggcggcg
cccagcctgcgcctgctcgatgcgctggatgcgctgaagatcctcctgccgcccgtggcc
gcctacttcaaggagcagggccgccgcggtcaggagaccttctactccttcgccgaggcg
ctcgaccggcgcgtggcttccggggagctgctggacgacgccatcctgctcgccgcgctg
ctggtgcccatcgcccaggcctcgcccgtcgtggagagcctggacgccgcgggccgtccc
tcggtgtcccaggccatcgaggacctgctggccgagttcgtccagacggcgcggctgccc
cgccgcatcgccgagcgctgccgtctgctgctcatcgcccagcgcacgctgtcgggggag
cggcgcaagaagacgggggccttccgccgccatccgctcttcgccgacgcgctcgtcgtc
ttcgagatctccgtcgaggccacgagtcgtcaccgcgacgcgctcgaggcgtggaagcgc
ggggacgtgccttcctcccgtccgtccaccgagggctccgccgccgagggagacgcgccc
cgcaagcgccgtcgtcggcgccgccgggggggaactcgcaacaagcccgggacgacggag
ggtgcctccaccgccccggcggccgcgggcgcttccgagtccacggccacggaggcctcg
gaggatgccctggacgaggcctcgggcgacgaggagtcggacgacacgttcgactccagt
gacgcggacgacgactccggcgaggacgcggagagcgcctccgacgaggggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system