KEGG   Cyanobium gracile: Cyagr_2285
Entry
Cyagr_2285        CDS       T02359                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
cgc  Cyanobium gracile
Pathway
cgc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cgc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cyagr_2285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgc03400]
    Cyagr_2285
DNA repair and recombination proteins [BR:cgc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cyagr_2285
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Cyagr_2285
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB UVR ResIII DEAD AAA_30 AAA_22 AAA_25
Other DBs
NCBI-ProteinID: AFY29395
UniProt: K9P8G8
Position
complement(2215154..2217163)
AA seq 669 aa
MPFQLHAPYEPKGDQPAAIEAMVKGVDGGERFQTLLGATGTGKTFSIANVIARTGRPTLV
LAHNKTLAAQLCNELREFFPNNAVEYFISYYDYYQPEAYVPVSDTYIAKTASINEEIDML
RHSATRSLFERRDVIVVASISCIYGLGIPSEYLKAAVKFAVGDKLDLRGSLRGLVNNQYS
RNDIEISRGRFRVRGDVLEIGPAYEDRLVRIELFGDEVEAIRYVDPTTGEILQSLETINI
YPAKHFVTPKERLQGAIQAIRTELRERLEVLNGQGRLLEAQRLEQRTSYDLEMLEQVGYC
NGVENYARHLAGREAGTPPECLIDYFPDDWLLVVDESHVTCSQLQAMYNGDQSRKQVLIE
HGFRLPSAADNRPLKGDEFWEKARQTIFVSATPGAWELTQSKGQVVEQVIRPTGVLDPIV
EVRPSEGQVDDLLGEIRLRADRQERVLVTTLTKRMAEDLTDYLAENGVRVRYLHSEIHSI
ERIEIIQDLRNGAYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAA
RHIDGVALLYADNLTDSMAKAISETERRRVIQHAYNERHGITPTPAGKRAGNAILSFLEL
SRRLSDDQLEEAAEQAEHNEVPLDALPELITQLEDKMKAAAKSLEFEEAANLRDRIKNLR
HKLVGRPAA
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgccattccagcttcacgccccctacgaaccgaagggcgaccaacccgccgccatcgaa
gcgatggtgaagggcgtcgacgggggcgaacgcttccagaccctcctcggtgccaccggc
accggcaagaccttctccatcgccaacgtgatcgcccgcacggggcgccccaccctggtg
ctggcccacaacaagaccctggcggcccagctctgcaacgagctgcgggagttcttcccc
aacaatgccgtcgaatacttcatctcctactacgactactaccagcccgaggcctacgtt
cccgtctcggacacctacatcgccaagaccgcctcgatcaacgaggagatcgacatgttg
cggcactcggccacccggtcgctgttcgagcggcgcgatgtgattgtcgtggcctcgatc
agctgcatctacggcctgggcatcccctcggagtacctcaaggccgccgtcaaattcgcg
gtgggcgacaagctcgatctgcgcggctccctgcggggtctggtcaacaaccagtactcc
cgcaacgacatcgagatcagccgcggccgcttccgggtgcggggcgatgtgctggagatc
ggtccggcctacgaggaccggctggtgcggatcgagctgttcggcgatgaggtggaggcg
atccgctacgtggatcccaccaccggcgagatcctccagagcctggagaccatcaacatc
tacccggccaagcacttcgtgaccccgaaggagcggctgcagggggcgatccaggcgatc
aggaccgaactgcgcgaacggctggaggtgctcaacggccaggggcggctgctggaggcc
cagcgtctcgagcagcgcaccagctacgacctggagatgctcgagcaggtgggctactgc
aacggggtggaaaactacgcccggcacctggccggtcgggaggctggcaccccgcccgaa
tgcctgatcgattacttccccgacgactggctgctggtggtggatgagagccacgtcacc
tgctcccagctccaggccatgtacaacggcgaccagagccgcaagcaggtgctgatcgag
cacggcttccggctgcccagcgccgccgacaaccggcccctcaagggggacgagttctgg
gagaaggcccgccagaccatcttcgtctcggccacccccggggcctgggagctgacccag
agcaagggccaggtggtagagcaggtgatccgccccaccggcgttctcgatccgatcgtg
gaggtgcgcccgtcggagggccaggtggacgatctgctcggcgagatccgcctgcgggcc
gaccgccaggagcgcgtgctggtcaccaccctcaccaagcggatggccgaggacctcacc
gactacctggccgagaacggggtgcgggtgcgctatctgcactcggagatccattcgatt
gagcggatcgagatcattcaggacctgcgcaatggcgcctacgacgtgctcgtgggcgtc
aacctgctgcgggagggtctcgacctgcccgaggtgtccctggtggcgatcctcgatgcc
gacaaggagggcttcctgcgggcggagcgctccctcatccagaccatcggccgggcggcc
cgccacatcgacggggtggccctcctctacgccgacaacctcaccgattcgatggccaag
gcgatctccgagacggagcggcgccgggtgatccagcacgcctacaacgaacgccacggc
atcacccccacgccggccggcaagcgcgccggcaatgcgatcctctccttcctggagctg
tcccgccggctcagcgacgaccagctggaggaggcggccgagcaggccgagcacaatgag
gtgcccctcgatgccctgcccgagctgatcacccagctggaggacaagatgaaggcggcg
gccaagagcctggagttcgaggaggcggccaacctgcgggaccgcatcaagaacctgcgc
cacaagctggtgggacggcccgcggcctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   RefGene (75)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (92)   

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