KEGG   Cricetulus griseus (Chinese hamster): 100759958
Entry
100759958         CDS       T02813                                 
Symbol
Vcl
Name
(RefSeq) vinculin isoform X2
  KO
K05700  vinculin
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04510  Focal adhesion
cge04520  Adherens junction
cge04670  Leukocyte transendothelial migration
cge04810  Regulation of actin cytoskeleton
cge04820  Cytoskeleton in muscle cells
cge05100  Bacterial invasion of epithelial cells
cge05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:cge00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100759958 (Vcl)
   04520 Adherens junction
    100759958 (Vcl)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100759958 (Vcl)
   04810 Regulation of actin cytoskeleton
    100759958 (Vcl)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100759958 (Vcl)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    100759958 (Vcl)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100759958 (Vcl)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cge04812]
    100759958 (Vcl)
   04147 Exosome [BR:cge04147]
    100759958 (Vcl)
Cytoskeleton proteins [BR:cge04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     100759958 (Vcl)
Exosome [BR:cge04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100759958 (Vcl)
SSDB
Motif
Pfam: Vinculin VMAP-M0
Other DBs
NCBI-GeneID: 100759958
NCBI-ProteinID: XP_027243318
UniProt: A0A8C2MQX8
Position
1
AA seq 1134 aa
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQSKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKPGIPAAQVGIGVVAEADAADAVGFPFPSDMEDDYEPELLLMPSNQ
PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK
DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS
DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgccggtgtttcacacacgcacgatcgagagcatcctggagccggtggcgcagcagatc
tcccacctggtgattatgcacgaggagggcgaggtggacggcaaagccattcctgacctc
accgcgcccgtggccgccgtgcaagcggcagtcagcaacctcgtccgggttggaaaagag
acagttcagaccaccgaggatcagattttgaagagagatatgccaccagcatttattaag
gttgagaatgcttgcactaagcttgttcaggcagcccagatgcttcaggctgacccatat
tcagttcctgctcgggattacctcattgatggctctagaggaatcctttctggcacgtca
gacttacttcttacctttgatgaagctgaggttcgtaagattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtagtggagactatggaagatttggtcacttac
acaaagaatcttgggccaggaatgactaagatggcaaaaatgattgatgagagacagcag
gaattgactcaccaggaacaccgagtgatgctggtgaactcaatgaacaccgtcaaagaa
ctgcttcctgttctcatttcagccatgaagatttttgttacaaccaaaaactcaaaaaac
caaggaatagaagaagctttgaaaaatcgaaattttactgtagaaaagatgagtgctgaa
attaatgagatcattcgtgtgttacaactcacttcttgggatgaagatgcctgggccagc
aaggacactgaagccatgaagagagccctggcgtccatagactccaaactgaaccaggcc
aaaggttggctccgtgaccccaatgcctccccaggggatgctggtgagcaggccatcagg
cagatcttagatgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag
atcctaggaacctgcaaaatgctagggcagatgactgaccaagtggctgacctccgagcc
agaggacaaggagcctctccagtggctatgcagaaggcgcagcaggtgtctcaaggtctc
gatgtgctcactgcgaaagtggaaaatgcagctcggaagctggaagctatgacaaactca
aagcagagtattgcaaagaagattgatgctgcccagaattggcttgcagatccaaatggt
ggacctgaaggagaagaacagattcgaggagctctggctgaagctcggaagattgcagaa
ttatgtgacgatcctaaggaaagagatgacatccttcgatcccttggagagatagctgct
ctgacctctaaattgggagatttacgaagacaagggaaaggagactccccagaggctcga
gcattggctaaacaggtagccacagccctgcagaacctgcagagcaaaaccaacagggct
gtggccaacagccgacctgccaaggcagctgtccaccttgagggcaagattgaacaagca
cagcggtggattgataatcctacggtagatgaccgtggagttggtcaggctgccatccgt
ggacttgtggctgaagggcatcggctggccaatgttatgatgggaccttatcgccaagat
cttcttgccaagtgtgaccgtgtagatcagctaacagctcagctggctgacctggctgcc
cgaggggaaggggaaagtcctcaggcaagagcacttgcatcccagcttcaagactcctta
aaggatcttaaagcccagatgcaggaagctatgactcaggaggtgtctgatgttttcagt
gataccacaactcctatcaagctgttggcagtggcagccacagctcctcctgatgcaccc
aatcgggaagaggtatttgatgagagggcagccaactttgaaaaccattcaggaaggctt
ggagccacagcggagaaggcggctgctgttggtaccgccaataaatcaacagtggaaggc
attcaagcatcagtgaagacagcccgagaactcactccccaggtcatttctgctgctcga
atcttactgaggaaccctggaaaccaagcagcttatgaacattttgagaccatgaagaac
cagtggattgataatgttgaaaagatgacagggctggtggacgaggctattgataccaaa
tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagcc
atggccaatattcagcctcagatgttagtcgctggagcaaccagcattgctcgtcgagcc
aaccggattctgctggttgctaagagggaggtagaaaactctgaggacccgaagttccga
gaggccgtgaaagctgcctctgatgaattgagcaaaacaatctccccaatggtgatggat
gccaaggctgtggctggaaacatctctgaccctggcctgcaaaagagcttcctggactca
ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccacctcctccaccagaccttgaacagctccgactaactgatgagcttgctcct
cctaagccacctctgcctgagggtgaagtccctccacccaggcccccaccaccagaagag
aaggatgaagaattccctgagcagaaagctggggaggtgattaaccagcccatgatgatg
gctgccaggcagctccatgacgaagctaggaagtggtctagcaagccgggtatcccagcc
gctcaggtgggtataggagttgtagctgaggcagatgcggctgatgctgttgggttccct
ttcccctctgacatggaagacgattacgaacctgagctgctgttaatgccatctaatcag
ccggtcaaccagcccattctggccgcggctcagtccttgcaccgggaagctaccaagtgg
tctagtaagggcaatgacatcattgcagcagccaagcgcatggctctgctgatggcagag
atgtctcggctggtaagagggggtagcggtaccaagcgggcacttattcagtgtgccaag
gacatcgccaaggcctctgatgaggtgactcggctggccaaggaggttgccaagcagtgc
acagataagcggattagaaccaatctcttacaggtatgtgagcgaatcccaactataagc
acccagctcaaaatcctatccacagtgaaggctaccatgctgggccggactaacatcagt
gacgaggaatctgagcaggccacagagatgctggttcataatgcccagaacctcatgcaa
tctgtgaaggagactgttcgagaagcagaagcggcttcaatcaaaattcgaacagatgct
ggatttactctgcgctgggtccgaaagactccctggtaccagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (14)   
   RefSeq(nuc) (4)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (71)   

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