KEGG   Cricetulus griseus (Chinese hamster): 100766261
Entry
100766261         CDS       T02813                                 
Symbol
Col17a1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X2
  KO
K07603  collagen type XVII alpha
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:cge00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100766261 (Col17a1)
SSDB
Motif
Pfam: Collagen DUF2868
Other DBs
NCBI-GeneID: 100766261
NCBI-ProteinID: XP_027262862
UniProt: A0A8C2MVE8
Position
3:13850534..13892500
AA seq 1456 aa
MDVTTKNKRDGTEVTERIITETVTTRLTSLPPKGSTSNGYAKTGSLGGGSRLEKQTLTHG
SSGYINSNGSIRGNASTSSYRRAHSPASTLPNSPGSTFERKTRMTRHGTYEGSSSGNSSP
EYPRKELASSATRGRSQTRESEIRVRLQSASPSTRWTELDEVKRLLKGSRSASASPTRNT
SNTLPIPKKGTVETKVVTASSHSVSGTYDTTILDTNLPPHMWSSTLPAGSSMGTYHNNMT
TQSSSLLNTNAYSAGSVFGMPNNMASCSPTLPPGLSSCSSVFGMQNNLAPSSSAVAHGTT
TTSTAYSVKKNVPQPPTVTSTGVSTSATCTTSVQSDDLLHKDCKFLILEKDNVPAKKEME
LLIMTKDSGKVFTASPASISSTSFSEDTLKKEKQAAYAADTCLKADINGDLNTVSTKGKA
TSVENHNYDRGGGGARGGGGGGGGAGAGGGTWGAAPAWCPCGSCCSWWKWLLGLLLTWLL
LLGLLFGLIALAEEVRKLKARVEELEKTRVQYFEDKTERSSKDRLLGDVPGMGPGLGKVG
LDGHSQEAIWLFIRNKLMTEQENGNLRGNPGPKGDMGSQGPKGDRGLPGTPGIPGPLGHP
GPEGPKGQKGSIGDPGMEGPIGQRGLEGPMGPRGEPGPPGSGEKGDRGIAGEQGPPGLPG
LPGSVGPRGPNGSAGPQGPPGSMGPQGLRGDVGLPGVKGDKGLVGPPGPKGDQGEKGPRG
LTGEPGIRGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGLTGMPGTRGLPGPSGDPGKPG
VTGPQGPQGLPGSPGRPGTKGEPGAPGRVMTAEGSSTITVPGPPGPPGAMGPPGPPGTPG
PAGPAGLPGQQGPRGEPGLAGDSFINSGSSISEVLSAQGVDLRGPPGPPGPRGPPGPAIP
GPPGPRGPPGEGAPGPPGPPGSFLTDSETFFSGPPGPPGPPGPKGDQGDPGIPGGHSHGE
ASSTTYRQGPPGPPGPPGPPGSFSSSGQDIQRYISEYMQSDSIRTYLSGVQGPPGPPGPP
GPVITITGETFDYSQLASQVVGYLRTSGYGVSLSSASSEDILAMLRRNDVWQFLRQHLVG
PPGPPGPPGVGGDGSLLSLDYGELSRHILNYMSSSGISFGHPGPPGPPGLPGTSYEELLT
MLRGSDYRDIIGPPGPPGPPGMPGSAWSSISVEDLSSYLHTAGLSSIPGPPGPPGPPGPR
GPPGVSAALATYAAENSDNFRSELISYLTSPDVRSFIIGPPGPPGPPGDSHLRENYNWGS
SSSARRGTSYSSSMGMGGANGGSLGEGGTFGTADGGPYGTDIGPGGGYGAAAGGLYGTDG
DSFRAGFTGDLDYNKLAVRVSESMQRQGLLQGMAYTVQGPPGVPGPQGPPGISKVFSAYS
NVTQDLMDFFRMHGAIPGPPGQKGEVGTPGPKGDRGLAGQRGPPGPPGPRGQKGEKGDKG
DQVYTGRRKRSIAIKP
NT seq 4371 nt   +upstreamnt  +downstreamnt
atggatgtgaccacgaaaaacaagcgagatggcactgaagtcactgagagaattatcacg
gaaacagtaactacaagactcacatccttaccaccaaaagggagcaccagcaatggctac
gcgaagacaggctctctgggtggaggaagtcggctagagaaacagaccctgactcatggt
agcagcggctacatcaactcaaatgggagcatccggggcaacgcttccacctccagttac
aggagagctcactcgccagcctccaccctgcccaactctccaggctccacctttgaaagg
aaaactcgcatgacccgccatggaacttacgaagggagctccagtggcaactcctcccct
gagtacccccggaaggaactcgcatcttctgcaaccagaggacgaagccaaacacgagag
agcgaaattcgagttcgcctgcagagtgcctctccatccaccagatggacagaactcgat
gaagtcaaacgtttgcttaaggggagccgatctgcaagtgcgagtcccaccaggaacacc
tccaacacactccccatccccaagaaaggcactgtagagacaaaagtggtgacagcaagc
tcccactcagtatcaggaacctatgacacgacaatactggacaccaaccttcccccccac
atgtggtcctccaccttgcctgcagggtcctccatggggacctatcacaacaacatgaca
acccagagctcatccctcctcaacaccaacgcctactcagcaggatcagtcttcggaatg
ccaaataacatggcgtcctgctctcccaccctgccccctggactcagcagctgctcctca
gtgtttggcatgcagaacaatctggcccccagctcttctgccgtagcccatggcacaacc
accacttccacagcatacagtgtaaagaaaaacgtgccacagccacccactgtcaccagc
accggtgtgtccacttctgctacctgcaccaccagcgtccagagcgacgacctcttgcat
aaagactgcaagttcctgattctggagaaggacaacgtacccgccaagaaagagatggaa
ctcttgatcatgaccaaggacagcgggaaggtctttactgcctccccggccagcatctct
tcaacttctttttcagaagacaccctaaaaaaagagaagcaggctgcatatgcggctgac
acatgcctaaaggcagatataaatggagacctaaatactgtgtccacaaagggcaaggcc
acctctgtagaaaaccataactatgaccgaggcggtggtggagccagaggcggcggcggc
ggcggtggcggtgccggtgccggtggaggaacctggggggctgcgcctgcctggtgcccc
tgcggctcctgctgcagctggtggaagtggttgctgggcctactgctcacctggctgctg
ctgctgggtctgctctttggcctcattgctctggcggaggaggtaaggaagctgaaagcc
cgagtggaggagctggagaagaccagggtgcaatattttgaagacaagacagagagaagt
agcaaggaccgtctcctgggtgatgtgcctggcatgggacctggattaggcaaagtgggg
ctggatggccacagccaggaggcgatctggctgtttataaggaacaagctgatgacagaa
caggaaaacggaaatcttcgaggaaatcctggtccaaaaggtgacatgggaagtcaagga
cctaaaggagaccgaggccttcctgggaccccaggtattcctgggcccctgggccaccct
ggcccagaaggaccaaagggacaaaagggcagcattggagatcctggcatggaaggaccc
ataggccagagaggactagaaggccccatgggacctcgtggtgaacctgggcctcctggg
tctggagagaaaggagacagagggattgctggagaacaaggtcctccgggcctccctggt
ctcccaggttctgtgggtcccagaggtcccaatggctctgctggcccacagggaccccca
ggttctatgggtccccaagggctccgtggtgacgtgggactccctggtgtcaaaggtgac
aaaggacttgtgggaccaccaggacccaaaggtgaccagggtgaaaaaggacccagaggc
ctcacaggggagcctggcattcggggtttacctggagctgtgggcgaacctggagccaaa
ggcgcaatgggtcctgctggccctgatggacagcaaggccccagaggtgagcaaggtctg
acagggatgcctggaacccgaggcctaccaggaccttctggagacccaggaaagccaggt
gtcacaggaccccagggaccacagggacttcctggtagccctggccgaccggggactaaa
ggtgaacctggtgctccaggcagagtcatgactgcagagggatcatcaactatcactgtc
cccggacctcccggacctcccggtgccatgggacccccaggacctccagggaccccaggt
cctgctggccctgctggtctcccaggacaacaaggcccacgaggggagccaggacttgct
ggtgactcatttataaacagtggcagctccatctccgaggtcctctctgcccaaggagtt
gacttgcggggtccccctggcccacctggcccacgagggccaccagggcctgccatccca
ggcccaccaggacctagaggtcctccaggggaaggcgcgccaggcccaccgggcccacca
ggatctttcctgactgactcagaaaccttcttctctggccctccgggtccacctggcccc
ccaggtcccaagggagaccaaggtgatcctggcatccctggcggtcactctcatggagaa
gcatccagcactacgtacaggcagggcccacctggccctccaggaccccctgggcctcca
ggctccttcagcagctctggccaggatatccagcgctacatctcagagtacatgcagagt
gacagcatcaggacctatctctctggagttcagggtcccccaggcccaccaggtcctcca
gggcctgtcatcaccatcacaggagagactttcgactactcccagctggcaagccaggtg
gtcggctacttgaggacgtcaggctacggtgtgagcttgtcctctgcctcctcagaagat
atcctggccatgctgcgacggaatgatgtgtggcagttcctacgtcagcacctggtgggc
ccaccgggtcccccagggcccccaggagttggtggagatgggtccctcctgtccttggac
tacggagagctgagcagacacattctcaactatatgtcaagttctggaatcagctttggg
catcctggcccaccgggcccccctggcctgccaggaacatcctatgaggagctactcacc
atgctccgagggtctgactacagggacatcattggacctccaggtccacctgggccaccc
gggatgccaggcagcgcgtggtccagcatcagcgtggaggacctctcatcttacctgcac
actgctggcctgtcctccatcccaggacccccaggacctcctggacccccaggtcctcga
gggcccccaggtgtctcagcagctctggccacctatgcagctgaaaacagcgacaacttc
cgtagcgagctgattagctacctcacaagtcctgatgtccgtagcttcatcattggccct
ccaggtcccccgggaccacctggagacagtcacttaagggagaactacaactggggtagc
agctcctcagcccgacgaggcacttcctacagctcttccatgggcatggggggagccaat
ggaggctccctgggcgaaggtggaacctttggtacagcagatgggggcccctatggcacc
gacatcggcccaggaggaggttatggggcagctgccggtggtttatatggcaccgatggc
gattcattccgggctggcttcactggagacctggattacaacaaactggcagtgagggtg
tccgagagcatgcagcgtcaaggcctactacaagggatggcctacactgtccagggccca
ccaggagtgcctggcccccagggccctcctggcatcagcaaggtcttctctgcctacagc
aatgtgacacaggacctcatggacttcttccggatgcatggagctattccaggcccacct
gggcaaaagggagaagtgggcaccccagggcccaaaggtgacaggggccttgctggacaa
cgaggtcctcctgggccaccaggccctcgagggcagaaaggagagaaaggagacaagggc
gaccaagtctacactgggagaaggaagagaagtattgccatcaagccataa

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (57)   

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