KEGG   Cricetulus griseus (Chinese hamster): 100768858
Entry
100768858         CDS       T02813                                 
Symbol
Col11a1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X3
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:cge00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100768858 (Col11a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cge00536]
    100768858 (Col11a1)
Glycosaminoglycan binding proteins [BR:cge00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100768858 (Col11a1)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1
Other DBs
NCBI-GeneID: 100768858
NCBI-ProteinID: XP_027251357
UniProt: A0A8C2MFS4
Position
1
AA seq 1804 aa
MEPWSRWKMKRWVWNLTISTIALTFLFQAREVRGAAPVDILKALDFHNSPVGISKTTGFC
TNRKNSKDSDIAYRVTEEAQISAPTKQLFPGGTFPVDFSILFTIKPKKGTQAFLLSIYNE
HGIQQLGVEVGRSPVFLFEDHNGKPSPEDYPLFSTVNIADGKWHRVAISVEKKTVTMIVD
CKKKITKPLDRSERSIVDTNGIMVFGTRILETDVFQGDIQQFLITGDPKAAYDYCDHYSP
DCDSTSKAAQAQEPQIDEYAPEDIIEYDYEYGETDYKEIESITEIPTVIEETVAQTEANI
VDDFQDYNYGTMETYQTESPRRLSGSNEPNPVEEGFTEEYLTGEDYDVQRNISEDILYGN
KGVDGRDSDLPVDGDLGEYDFYEYKEYEERTTISPNEEFGPGVPAETDFTETSINGHGTY
GEKGQKGEPAVVEPGMLVEGPPGPAGPAGLMGPPGQQGPSGPPGDPGDRGPPGRPGLPGA
DGLPGPPGTMLMLPFRYGGDSSKGPVVSAQEAQAQAILQQARIALRGPPGPMGLTGRPGP
VGGPGSAGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGF
DGLPGLPGDKGHRGERGPQGPPGLPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGP
PGQPGIAGIDGPQGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGL
AGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE
DGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGL
PGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGP
KGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPGHPGQRGETGFQGKTGP
PGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKSGP
AGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAGTAGPIGLPGRPGPQGP
PGPAGEKGAPGEKGPQGPAGRDGIQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD
KGENGPPGPPGLQGPVGAPGIAGGDGEAGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGL
PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEAGN
PGPPGEAGSGGPKGERGEKGEAGPPGAAGPAGAKGPPGDDGPKGNPGPVGFPGDPGPPGE
PGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAPGSEGRQGEKGAKGE
AGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGL
KGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGPPGP
PGLPGPAGPKGNKGSSGPTGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHTESIQ
SDAGDNIIDYADGMEEIFGSLNSLKQDIEHMKFPMGTQSNPARTCKDLQLSHPDFPDGEY
WIDPNQGCSGDSFKVYCNFTAGGETCIYPDKKSEGVRISSWPKEKPGSWYSEFKRGKLLS
YLDVEGNSINMVQMTFLRLLTASARQNFTYHCHQSTAWFDMSSASYDKALRFLGSNDEEM
SYENNPHIKALYDGCASRKGYEKTVIEINTPKIDQVPIIDVMINDFGDQNQKFGFEVGSV
CFLG
NT seq 5415 nt   +upstreamnt  +downstreamnt
atggagccctggtccaggtggaaaatgaaacgatgggtctggaatctcaccatctcaacc
atcgccttgactttcctcttccaagccagagaggtcagaggagctgctccagttgatata
ctaaaagcactagattttcacaattctccagtggggatatctaaaacaacaggattttgt
acaaacagaaagaattctaaagattcagatattgcttacagagttacagaggaagcacaa
atcagtgccccaacgaaacagctatttccaggtggaacttttcctgtagatttttcaata
ctatttacaataaaacccaaaaaaggaacccaagctttccttttatcaatatataatgaa
cacggtattcagcaacttggtgttgaggttgggagatcacctgtctttctgtttgaagac
cacaatgggaaacccagccctgaagactatcccctgttctcaacagttaacatcgctgat
gggaagtggcatcgggtcgcaatcagtgtggagaagaaaactgtgacaatgattgttgat
tgtaagaagaaaatcacaaaacctctcgatagaagcgagagatcaatagtcgataccaat
ggaatcatggtgtttggaacaagaattttagaaacagatgtttttcagggtgatattcag
cagttcttgatcactggtgaccccaaggcagcatatgactactgtgaccattacagtcca
gactgtgactcaacatccaaggctgctcaagctcaggagccacagatagatgagtatgca
cctgaggatataatcgagtatgactatgagtatggggaaacagactataaagagattgag
agtataacagagatacccactgtcattgaagaaacagtagcccaaacagaggcaaatatt
gtggatgattttcaggactacaactatggaacaatggaaacttaccagacagagtctcct
aggcgcttatcaggatcaaatgagccaaatccagttgaagaaggttttactgaagaatat
ctaactggagaggattatgatgtccagagaaacatttctgaggatattctatatggaaac
aaaggagtagacggcagggactctgatctgccagtagatggagatttaggcgaatatgat
ttttatgaatacaaggaatatgaagaaaggacaacaatctcccctaatgaagaatttggc
ccaggtgttccagcagaaactgatttcacagaaacaagcataaatggccatggcacatat
ggagagaaaggtcagaagggggaaccagctgtggttgaacctgggatgcttgttgaagga
ccacctgggccagcaggaccagcaggtcttatgggtcctccaggtcaacaaggcccttct
gggccccccggtgaccctggtgataggggccccccaggacgtcctggcttaccaggggct
gatggtctacctggtcctcctggaaccatgttgatgttaccattccgctatgggggtgac
agttccaaaggaccagtggtctctgcacaggaagctcaagctcaggcgatacttcagcag
gctcggattgctctgagaggcccacctggcccaatgggtttaactggaagaccaggtcct
gtggggggtcctggttcagctggagccaaaggtgagagtggggatccaggtccccagggc
cctcgaggtgtgcaaggtccacctggtccaacaggaaaacctggaaagaggggccgtcca
ggtgcggatggaggacgagggatgccaggagaacctggatctaagggagacagaggattt
gatggacttccaggtcttccaggtgacaaaggtcataggggagaaagaggcccacaaggt
ccccctggccttcctggtgatgatggaatgaggggagaagatggggagatcgggcccagg
ggtcttccaggtgaagctggtccacgaggcttgctgggaccacggggaactccaggacct
cctgggcagcctggtatcgcaggtatagatggcccacaaggacctaaaggaaacatgggt
cctcaaggggagcctggacctcctggtcagcaagggaatccaggacctcagggtcttcct
ggtccacaaggccctattggccctcctggcgaaaagggaccacaaggaaagccaggactt
gctgggcttccaggtgctgatgggcctccgggtcaccctggaaaagaaggccagtctgga
gaaaagggggccctgggtcctcctggtccacaggggcctattggctatcctggtccccgt
ggagtaaagggcgcagatggtgtcagaggtctcaagggatctaaaggtgaaaagggtgaa
gatggctttccagggttcaaaggtgacatggggcttaaaggtgacagaggagaagtggga
caagttggcccaagaggagaagatggccctgagggccccaaaggccgtgcaggcccaact
ggagacccaggaccctctggtcaagcaggggagaaggggaaacttggggttccaggattg
ccgggatatccaggaagacaaggtcctaagggctccactggatttcctggatttccaggt
gccaacggggagaaaggtgcccggggagttgctggcaaaccaggcccccgcggtcaacgt
ggtccaacgggtcctcgaggttccagaggtgccagaggtcctacagggaaacctgggcca
aagggtacttcaggcggtgatggccctcctggccctccaggtgaaagaggccctcaagga
cctcagggtccagttggattccctggaccaaaaggaccccctggccccgctgggaaggac
ggactaccaggacaccctgggcagcgtggagagactggatttcaaggcaagaccggtccc
cctgggccaggaggtgtggttggacctcagggaccaactggggagactggtccaataggt
gaacgtgggcatcctggacctcctggtcctcctggtgagcaaggacttcctggtgctgca
ggaaaagaaggtgcaaagggtgacccaggccctcaaggtatctcagggaaaagtggacca
gcaggaatacgtggtttcccaggtgaaagaggtcttcctggagcccagggtgcacctgga
ctgaaaggaggagaaggtccccaaggcccacagggtccagttggctctccgggagaacga
ggctctgcaggcacagcagggccaattggcttgccaggccgtccaggtccccagggccct
cccggtccagctggagaaaaaggtgctcctggagagaagggtcctcaaggccctgcaggt
agagatggaatccaaggccctgtgggtctccctgggcctgctgggcctgctggctctcct
ggtgaggatggagacaagggtgaaattggagaaccaggccaaaagggcagcaaaggtgac
aaaggcgaaaatggccctcctggtcccccaggtcttcaaggacctgttggtgcccctggg
attgctggaggagatggtgaggcaggtcccagaggacagcagggaatgtttggacaaaaa
ggtgatgagggggcacgaggtttcccaggacctcctggacccataggtcttcaggggttg
ccagggccaccaggcgaaaagggtgaaaatggagatgttggacccatgggtccaccaggt
cctcctggcccacgaggccctcaaggtcccaatggagctgatggaccacaaggaccccca
ggctctattggttctgttggaggtgtgggagaaaagggtgaacctggagaagctgggaac
cccgggcccccgggtgaagctggctcaggtggtcccaaaggagagagaggagagaaagga
gaagctgggccccctggtgctgctggtcctgctggtgctaaagggccaccaggtgatgat
ggccccaaggggaatccgggacctgttggttttcctggagatcccggtccacctggggaa
cctggccctgcagggcaagatggtgtcggaggtgacaagggtgaagatggagatccaggg
caaccgggtcctcctggtccatccggtgaggctggcccaccaggtcctcctggaaaaaga
ggtcctcctggggctccaggttcagaaggaaggcaaggtgaaaaaggtgctaagggagaa
gctggtgctgaaggacctcctgggaaaactggccctgttggacctcagggtccttctgga
aagcctggtccagaaggtcttcgaggaatccctggtcctgtgggagaacaaggactcccc
ggtgctgctggacaagatggaccccctggtcctctgggacctcctggtttacctggtctc
aaaggtgaccctggctccaagggtgaaaagggacatcctggattaattggattgattggc
cctccaggagaacaaggggagaaaggtgacagaggactccctgggactcaaggttctcca
ggagccaaaggggatgggggcatcccaggtcctgctggtcccataggccctcctggtcct
cctggattaccaggtcctgctggcccgaagggtaacaaaggatcttctggacctactggc
cagaagggtgacagtggtctgccagggcctcctgggcctccaggtcctcctggagaagtc
atccagccattaccgattttgtcacctaaaaagacaagaagacatactgaaagcattcag
tctgatgcaggggataatattattgattatgcagatggaatggaagaaatatttggttcc
ctgaattctctgaaacaagacattgaacatatgaagtttccaatgggtacacagagcaat
ccagcccgaacatgcaaagacctgcagcttagccaccctgacttcccagatggtgaatat
tggattgatcctaaccaaggttgttctggagattccttcaaagtgtactgtaatttcaca
gctggtggtgagacgtgcatctatccagacaaaaaatctgagggagtaagaatttcatca
tggccaaaggagaaaccaggaagctggtacagtgaatttaagagaggaaaactgctttca
tatttagatgtggaaggcaattccattaatatggtgcaaatgacattcctgagactcttg
actgcttctgcccgacaaaatttcacctaccattgccatcagtcaactgcatggtttgac
atgtcatctgcaagttatgacaaagcacttaggtttctgggatctaatgatgaggagatg
tcctatgagaacaacccacacatcaaggcattgtatgacggctgtgcgtccagaaaaggc
tatgaaaagactgtgattgagatcaataccccgaaaattgaccaggtacccatcattgat
gtaatgatcaatgattttggtgatcagaatcagaagtttggatttgaagtcggttcagtt
tgctttcttggctga

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