KEGG   Cricetulus griseus (Chinese hamster): 100770307
Entry
100770307         CDS       T02813                                 
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X7
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03082  ATP-dependent chromatin remodeling
cge04714  Thermogenesis
cge05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100770307
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    100770307
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    100770307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cge03021]
    100770307
   03036 Chromosome and associated proteins [BR:cge03036]
    100770307
Transcription machinery [BR:cge03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100770307
Chromosome and associated proteins [BR:cge03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     100770307
  Chromatin remodeling factors
   BAF complex
    100770307
   PBAF complex
    100770307
   GBAF(ncBAF) complex
    100770307
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC Bromodomain HSA BRK QLQ ResIII HDA2-3 DEAD
Other DBs
NCBI-GeneID: 100770307
NCBI-ProteinID: XP_027262273
UniProt: A0A9J7JJ57
Position
3:complement(34600503..34772163)
AA seq 1621 aa
MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMSTM
GSADFPQEAIHQMHKPMDGIHDKGIIDDAHCGSMKGASMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGPLIPGDLQAMNQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQPQQPQQQPQQ
PQQQAQPQPQQQQPALVSYNRPSGPGQEMLMSGQSTPQKLSAPAPSGRPSPAPPAAAQPT
ATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRI
QELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRS
KRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSK
AVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVA
NLTNLVWEHKQAQAAKEKKKRRRRRKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVT
HTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEE
KILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSAL
LINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLI
IVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKH
ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFL
LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQL
PEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNH
PYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSL
MTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAA
DTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV
IQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDM
DRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSD
ALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVEKDPVKEDVEKAKKRRGRPPAEKLSP
NPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNRSGPALYPHVSKHSSGRQLSE
VFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEG
SQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEGKTLHLAPSTYRAI
STAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQDENEQSEASGTDD
E
NT seq 4866 nt   +upstreamnt  +downstreamnt
atgtccacacccacagacccagctgcaatgccccatcctgggccttccccggggcctgga
ccctctcctggaccaattctggggcccagtccaggaccaggaccatccccaggttcggtc
cacagcatgatggggcccagtcctggaccgcccagtgtctcacatcctatgtcaacaatg
ggctctgcagactttccacaggaagccatacaccagatgcataagcccatggacgggata
catgacaagggaattatagacgatgcccactgtggatccatgaagggcgccagcatgcgc
ccaccacacccgggaatgggccctccacagagcccaatggatcagcacagccaaggttat
atgtcaccacatccttctcctttgggagccccagagcacgtctccagccctatatctgga
ggaggcccaaccccaccccagatgccaccgagccagccagggccactcatcccaggagat
ctgcaggccatgaaccagcctaacagaggtccttcgcctttcagtcctgtccagctgcat
cagcttcgagctcagattttagcttacaaaatgttggccaggggccagcccctccctgaa
accctgcagcttgcagtccaggggaaaaggaccttgcctggcatgcaacagcaacagcag
cagcagcagcagcagcaacagcaacagcagccccagcagcctcagcagcagccccagcag
cctcagcagcaggcgcagccacaaccgcagcagcagcagcctgcccttgttagctacaac
agaccatctggccctgggcaagagatgctgatgagtggccaaagcaccccacagaagctg
tcagcaccggcacccagcggccggccgtcgcccgcacccccagccgctgcccagcccacc
gccacagctgtgcccgggccctcggtgcagcagcctgccccagggcagccgtctccggtc
ctgcagctgcaacagaagcagagccgtatcagcccaatccagaaaccgcaaggcctcgac
cccgtggagatcctgcaggagcgagagtacagactgcaggctcgcatagctcataggata
caagaactggaaagtctgcctggctctttgccaccagatttacgaaccaaagcaactgtg
gaactgaaagcacttcggttactcaatttccagcgtcagctgagacaggaggtggtggcc
tgcatgcggagggataccaccctggagacggccctcaactccaaagcatacaagcggagc
aagcgccagacccttcgagaggcgcgcatgacggagaaactggagaagcagcagaagata
gaacaggagaggaaacggaggcagaagcaccaggaatacctgaacagtattttgcaacat
gcaaaagattttaaggagtatcaccggtctgtggctgggaagatccagaagctgtccaaa
gcagtggcgacttggcatgctaacactgaaagggagcaaaagaaggaaacagagcggatc
gagaaggagagaatgcggaggctgatggctgaagatgaggagggctacaggaaactcatt
gaccaaaagaaagacagacgcttagcataccttttgcagcagaccgatgagtatgtggcc
aatctgaccaacctggtttgggagcacaagcaggcccaagctgccaaagagaagaagaag
aggaggaggaggagaaagaaggctgaagagaatgcagagggaggggagtctgccctggga
cccgatggagagcccattgatgaaagcagccagatgagtgacctgcccgtcaaagtgacg
cacacagaaactggcaaggtcctctttggtcctgaagcacccaaagcaagtcagttggat
gcctggctggagatgaatcctgggtatgaagttgctcccagatctgacagcgaagagagt
gactctgattatgaggaagaggatgaagaagaagagtccagtaggcaggaaacggaggag
aagatactgctggatccaaacagtgaagaagtttccgaaaaggacgccaagcagatcatt
gagactgcgaaacaggatgtggacgatgaatacagcatgcagtacagtgccagagggtcg
cagtcctactacacggtggcccatgccatctccgagagggtagagaagcagtctgccctc
ctcattaatgggaccctaaagcattaccagctccagggcctggaatggatggtttccctg
tataataacaatttgaatggaatcttagctgatgaaatggggctaggcaagaccatccag
accattgcactcatcacatatctgatggagcacaaaagactcaatggcccctatctcatc
attgttcccctctcgactctgtctaactggacatatgaatttgacaaatgggctccttct
gtggtgaaaatttcttacaagggtacccctgccatgcgacgctcccttgttccccagcta
cggagtggcaaattcaatgtcctcctgactacttatgaatacattataaaagacaagcac
attcttgcaaagattcggtggaaatacatgattgtggatgaaggccaccgaatgaagaat
caccattgcaagctgactcaggtcttgaacacacactatgtcgcccccagaaggatcctt
ttgactgggaccccgctacagaataagctccctgaactctgggccctcctcaacttcctt
ctccctacaatcttcaagagttgcagcacatttgagcagtggtttaatgctccatttgcc
atgactggcgaaagggtggacttaaatgaagaagaaactatcttgatcatcaggcgtctg
cacaaggtgttgagaccctttttactgaggagactgaagaaagaggttgaatcccagctt
ccagaaaaggttgagtatgtgatcaagtgcgacatgtcagctctgcagaagattctgtat
cgtcatatgcaggccaaggggatcctcctcactgacggttctgaaaaagataagaagggg
aaaggaggtgccaagacgcttatgaacactatcatgcagctgagaaaaatttgcaaccac
ccatatatgttccagcacattgaggaatcctttgctgaacacctgggctattcaaatggg
gtcatcaatggggctgagctgtatcgggcctcaggaaagtttgagctacttgatcgtatt
ctgcccaaattgagagcaactaaccaccgcgtgctgcttttctgccagatgacgtctctc
atgaccatcatggaggattactttgcttttcggaacttcctttacctgcgccttgatggc
accaccaagtctgaagatcgggctgctttgctgaagaaattcaatgaacctgggtcccag
tatttcattttcttgctgagtacacgagctgggggcctgggcttaaatcttcaggctgcg
gacacagtggtcatctttgacagcgactggaatcctcatcaggatctgcaggcccaagat
cgagctcaccgcattggccaacagaatgaagtccgggttctgaggctctgcactgtcaac
agtgtggaggaaaagattctcgcagctgcaaagtacaagctgaatgtggaccagaaggtt
atccaggcgggcatgtttgatcagaagtcctccagccacgagcggagagcattcctgcag
gccatattggagcatgaagaggagaatgaggaagaagatgaagtaccagacgacgagacc
ctgaaccagatgattgctcgccgggaagaagagtttgatctttttatgcgcatggacatg
gaccggaggagggaggatgccagaaacccaaagcgcaagcctcgcctgatggaggaagat
gagctgccctcctggattattaaggatgacgcggaagtggaaaggcttacctgtgaagaa
gaggaggagaagatatttggtaggggttctcgccagcgccgggatgtggactacagcgac
gccctcaccgagaagcagtggctccgggccatcgaagacggcaatttggaagaaatggag
gaggaagtacggctcaagaagagaaaaagacgaagaaatgtggagaaagatcctgtgaag
gaggatgtggaaaaggcgaagaaaagaagaggccgccctccagctgagaaactgtcacca
aacccccccaaactaaccaagcagatgaacgccatcatcgatactgtgataaactacaaa
gataggtgtaacgtggagaaggtgccctgtaattctcagttggaaatagaaggaaacagg
tcaggacctgccttgtatccccatgtctctaaacacagttcagggcgacagctcagtgaa
gtcttcattcagttaccttccaggaaagagttaccagaatactatgaattaattaggaag
ccagtggatttcaaaaagataaaggaaagaattcgtaatcacaagtaccggagcctgggt
gacctggagaaagatgtcatgcttctctgtcacaatgcacagacattcaacttggaggga
tcccagatctatgaagactccattgtcctacagtcagtatttaagagtgctcggcagaaa
atcgccaaagaagaggagagtgaggaagaaagcaatgaagaggaggaggaagatgatgaa
gaggagtctgagtcagagggtaagaccctgcatctggccccttccacctatcgggctatt
tccacagccaaatctgtgaaggtgaaaatcaaactcaataaaaaagaagagaaaggccgg
gacacagggaaaggcaagaaaaggccaaaccgaggcaaagccaaacctgttgtgagcgat
tttgacagtgacgaggaacaggatgagaacgaacagtcagaggcaagtgggactgatgat
gagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (15)   
   UniProt (1)   
   RefSeq(pep) (14)   
DNA sequence (22)   
   RefSeq(nuc) (14)   
   GenBank (4)   
   EMBL (4)   
Protein domain (10)   
   Pfam (10)   
All databases (60)   

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