KEGG T02232: CGB

Cryptococcus gattii: CGB_A6120C

Entry

CGB_A6120C CDS T02232

Definition

DNA ligase

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

cgi Cryptococcus gattii

Pathway

cgi03030	DNA replication
cgi03410	Base excision repair
cgi03420	Nucleotide excision repair
cgi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:cgi03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:cgi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cgi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cgi03430]

SSDB

Motif

Pfam:

DNA_ligase_A_N DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

321249873

NCBI-GeneID:

10188854

UniProt:

E6QY39

Position

A:complement(join(1219851..1220040,1220091..1220253,1220314..1220466,1220525..1220915,1220973..1221291,1221356..1221864,1221916..1221933,1221994..1222405,1222477..1223159))

AA seq 945 aa
MPVDTSVKKRTKLKAASITPPSKKFKQAAVIQQRPISSFFHSPAKSSVKAKEVIVIEDSD
SDDYPQSSTQAATAHGGNGNLESSRNCDLQPPEEGQMSSLGYVKEKNGHDLASTSGIFHE
RLKATPNGTAISSLTEGQGSNDRVHYFSRNPKRITGDELAITSNIITSASKDSAEKIDFD
HDPFTFDPSQIAATSWPKGRLPYSILVGVYGQVSSTKSRLAIIRILTNFLHLLMHTSPPD
LTPCLYLLSNHLTPSYIHCDLGIGSSILSKSIQEVSGLQARDLKHLWQKYGDPGDVAFEA
RSKLRTLVQPAPLLAGEVYDKLLEISRVKGNNSGKIKNELVRKLLIRAKGEEVRFLVRSI
IGNLRIGAVRLTLLTALARATTIIRLPADLKQSIIPLLRATVNADGNDKRSVITKARPDV
ARDTAETLCLDAIRIVRKVYVRHPNYGDLVAGLKEGVESLEDKVPVSVGIPLSPMLGSIT
RSMNEVFTRLGHLSFTAETKLDGQRGQLHVRLDGPEGKDDGGGRWVNADNGTKLWVRLFS
RHLEDMTDKYPDICHLALELLSRPLPTERPPFPALSSQPSSRVLDLLNISNVTSVVMDTE
IVALDKDNGNFRTFQELSNRGKKDVKMEDIKVVVGVFAFDLMVINDVSLLDLPFSHRRHL
LHTLLPSFTPKSNQVGHPVARFTHVEYIDSANLTDPAAELQTFFERVVEKKCEGLMVKLL
ENGEGLAGEDATEDDLDRERGQEIKSEQKNGGRNKRQPLPATYEPDQRSQGWLKVKKDYL
EGLGDSLDLVPIGAWWGQGRKAGWWSPILLACHNPDSGALEAVCKCMSGFSDAFYKDLSK
RYPAEGMPGKCSKIAPLGFVNTNGLIPDVWFEPSEVWEIKGADITLSPVYPAASSHLGSE
RGLSVRFPRFIRMRDDKKWEDAMTSDQLADMYRRQMKESETTTKD

NT seq 2838 nt +upstreamnt +downstreamnt
atgcccgttgataccagcgtcaaaaagcggacgaaactcaaggcagcatccatcacaccg
cccagtaagaagttcaagcaagcggccgtcatccagcaacgtccaatatcgtctttcttt
cattcacctgctaaaagcagtgtcaaggccaaagaggtcattgtcatagaggattcagat
tccgatgattatccccagtcctcgacgcaggcggcgacagcacatggcgggaatggtaat
ttggaatcctccagaaactgcgatctccaaccacctgaagaaggtcagatgagctcccta
ggatatgtgaaggagaaaaatggacatgatctggccagtacttcaggaatttttcatgaa
agactaaaggcaacgcctaatggaacggctatctcatcactaacggaaggacaaggatca
aatgatcgagtacactacttctcccgaaaccccaagagaataacgggcgacgaacttgct
attacctccaatatcattacatctgcttcaaaggactcggctgaaaagatagattttgat
cacgatccattcaccttcgatccgtcccaaattgcagcaacttcttggcctaagggtcgt
ctaccatacagtattctcgtcggtgtgtatggacaggtttccagtacaaaatcacgacta
gctatcatacgaatcttgacgaatttccttcatttgctcatgcatacttcaccaccagat
ttaacaccttgcctttatctcctttccaatcaccttaccccttcctatattcattgcgat
cttggcattggatcttctatactgtcaaaaagtatacaagaagtctcgggtcttcaggct
cgagatctcaaacacctatggcaaaaatatggcgatcctggtgatgtcgctttcgaagcg
agaagtaaactacgaacattagtgcagccagccccacttctggcgggggaagtgtacgat
aagttgttggaaatttcgagagtgaaggggaataatagcggaaaaattaaaaatgagcta
gtcaggaagttgttgatccgggccaaaggagaagaagttagatttcttgtccgaagcata
ataggcaacttgaggataggtgccgttagacttactcttttgaccgccttggcacgcgcc
acgaccataatacggcttccagctgaccttaaacagtctataatacccctcttaagggcc
acagtcaacgctgacggaaatgataaacgctcagtcattacaaaggcccgaccagacgtc
gctcgcgacaccgctgagactctctgtctggatgccatacgcatagtgcggaaagtgtat
gtgcgacatccaaattacggagaccttgtcgctggcctcaaggaaggagttgaaagtttg
gaggataaagtgcctgtgagcgttgggatcccactgtctcccatgctagggtccatcaca
agatcaatgaatgaagtgttcacgagattagggcatctttcgtttacagcagagactaaa
ctagatggtcagagaggacagcttcatgtcagactggatggtcctgaaggaaaagatgat
ggcgggggtagatgggttaatgcggataacgggaccaaactttgggttagactattcagc
aggcatttggaagatatgaccgacaagtaccccgatatctgtcacctagctcttgaactt
ctctcgcgacctcttccgacagaacggccgccattcccggcgctttccagtcaaccttcg
tcaagagtcctcgacttgctgaacataagtaatgtcacatcagtggtcatggataccgaa
attgtagctttggataaagataacggtaacttccgaaccttccaggagctatccaacaga
gggaaaaaagacgtgaaaatggaggacatcaaagttgtagttggggtttttgcctttgac
ttgatggtcatcaatgacgtgtcattactggacctccctttttcacatcgaaggcatctc
cttcacactctgctcccctctttcactcccaaatcaaatcaagttggacaccctgtggca
cgctttacacacgtcgaatacattgactctgccaatctcaccgatcctgctgcggagttg
caaacattcttcgaaagggttgtagaaaaaaaatgcgaaggcttgatggtcaaattatta
gaaaatggtgaaggcttggcaggggaagatgcaacagaagatgatttagatcgtgaaagg
ggccaggaaattaagtcggagcagaaaaacgggggtaggaacaagcgtcaacctcttccc
gccacctatgagccagatcagcgcagtcaaggttggctcaaggtaaagaaagattatctt
gaagggttaggggattctctcgatctcgtacccattggcgcatggtggggtcaaggccgt
aaagcgggttggtggagtcctatcctcttagcctgccacaaccctgacagtggcgccctg
gaagcagtctgcaaatgcatgtctggtttttcagatgcattttacaaagatcttagcaag
cgttatcccgctgaaggaatgcccggcaaatgcagcaagatagcacctcttggattcgta
aatacaaatggtttgataccagacgtgtggtttgagcctagcgaagtatgggagattaaa
ggcgccgatatcaccctctctcccgtctatccggcggcttcgtcgcatcttggatctgaa
agggggttgagtgtccgatttcctcgtttcatacgcatgcgagatgacaagaaatgggag
gacgctatgacgagtgatcaacttgccgacatgtacaggcgccagatgaaggaaagcgag
acgacaaccaaagactag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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