KEGG   Cryptococcus gattii: CGB_A8650W
Entry
CGB_A8650W        CDS       T02232                                 
Name
(RefSeq) regulation of transcription from Pol II promoter-related protein
  KO
K12609  CCR4-NOT transcriptional complex subunit CAF120
Organism
cgi  Cryptococcus gattii
Pathway
cgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGB_A8650W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_A8650W
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CGB_A8650W
SSDB
Motif
Pfam: PH PH_9
Other DBs
NCBI-GeneID: 10188333
NCBI-ProteinID: XP_003191709
UniProt: E6QYN0
Position
A:join(1769023..1769331,1769509..1770208,1770264..1771025,1771194..1771300,1771371..1773809,1773860..1774009,1774062..1774562)
AA seq 1655 aa
MQSTPGQGQPQVQSPPPLLPLLPASQYAHGGRGQAQGFPPPQPAYAGDGIGRASSAGTGT
GTGAAGAAGAAGAERVKEKRRSGFGWLGGKKKDKEKEEREKINNRPRPSSFSVDRPSTQS
QTRAVPASASQAFPQSPPPQTPLQPQPQPQPQHATRPFAQHQRPSPPPGQPLRALSASAE
QGAQAYEGQRSHSLDLGHMQQQQQGEYRSSISSGQGKGSPLAPHIPRSASMPMQPPAAGT
TPNGGSGSPRRGSSFVNPPQPDTAGPANASQADMDRFRSIVDLIAIQPQKTYVTSPPELE
MILARTSGGGQPKQGQPGSATNDWDAVWLQLSGISLSMWSMKETRAAAAKGDKVPPTYFN
ITDSSLELLAPLPPPPHRPNSHPHHFVFSLNTAGSNRLLFSCPTERDLARWATGLRLAAW
ERARLEEIYTGHLVQSGGREPPVEVGKGRSRMEGWVRVRVMGGTEWRRLWLVLSTPREGK
EEEKKSKRRSFFGMGGREEEQVPSEPNTGMVMASFYTEQRTSKNKTSVVPILTITNVSQT
YAVFPERLEVMSQSNLFKVVGRISGEMVTVEGRLRDSGWALLMPEHPENAGFHDAFKLYG
RPEKYVWDIKDPKGLFFAYPQGQDRLNLFLDIEEALHGDLRVTTLAGVRSKFVSLVHRRQ
HSNQKRPKDENTDQFSGENEDQGFQRQDGNFRLPPLSFNEASQDPNMPRSLTPITERTDV
ASRQNSTRTSNSAFTVVGLGGAPGTGGSGDRKTSGTSSKHGSQSSNKHEEHERDRLPQVA
NDIHQVFGPLTEEPGEAYSTSGSNSIATPRVVPAPLPGGGGGIQRGGIPSSSVESTSVYS
QDTGVTPHQSAKPSPPPPIPSAPPLSAGPEEQTSDEGLPHPSVLTFPIARGQKSPLGQPV
IANPDPPSASPPTPQPPAKQQLPVQPATTSQVLSPTPRKASSSGDTVPHGMELREEPAAM
YLMNMVEETTPVPKPLVPKAVSPQRPTINTNFDGQGGLLNPITKPVTGGNQEASAVGKKD
ALGRKPSGARALPAKRSGGTRMETIEDRSAGSQIQEDGQTQTQAAASAEPSRTKVSSQTP
QVDLGDDVSSYMNYADNPSPVKPKTEPLQVTKPVAAATKTVSPPQEEIRSSFAPSKAAVE
RRAKAEQTAREQEMAKRMPGGGKRTVNNVNTMSGFESSDEESEEESEEDSPMTQKRQEQP
LSRTASKASEQAAPNAPQRTTSINARALPPVPRIQQPPEVRSPAENNEPRTRRDSQFSQS
AGQYDSRASQFMERPRPASRTPSPGSGNVANGRPISTLVYNNNGGSYPIPGPRHSPANNA
PPATRQTVWNANFSTEHGMPEQNKSGKFVELEEPSVQLTKAFAPHGLLQAGMQDKEDRSA
KKQEELARETGSSLINVAAKPPPPQTGLVGAVAAHERDRKNAGGIGATLTDREREKRLVE
DKQREIERLQKQQMGQFGGDMYPQNFGYPMSPGPMGMGMNMPMMNMGYPGQMNPYVQQQA
MLAAQMAYQQTMMAMSQAGSQAGDFPDRTQSSSQLRSRQQPGADGRSISPTGSMGGPTSP
PPMGVPSFYGYPQGMGMSPQMGMGGMGMPPMQMPWMMSPGAMWGMATPPTGPGSPMVQPR
YDYMQSGTAGMGSESSSARTKNRGSSGEDLGQRVN
NT seq 4968 nt   +upstreamnt  +downstreamnt
atgcaatccaccccgggccaaggacaaccacaagtccaatcaccacccccgttgctaccg
ctgctgccggcctcgcaatacgcgcacggtggtcgaggccaggcgcaggggtttccgcct
cctcagccggcatatgccggcgatggtattggacgagcgagcagtgcgggtacggggacg
gggacgggtgcggcgggtgcggcgggtgcggcgggtgcggagagagtaaaggagaagaga
cggagtgggtttggatggctaggcgggaagaaaaaggacaaggaaaaggaggagcgggaa
aagatcaataaccgtccccgcccctcgtccttttccgtcgaccgcccgtctacccagtcg
cagacacgtgccgtccccgcctctgcctcccaagcgttcccccagtcccccccgccgcag
acgcccctacagccccagccccagccccagccgcaacacgcaacccggccattcgcacag
caccagcggccgtcgcctccgcccggacagcccctgcgcgccctgtcggcaagcgcggag
cagggggcccaagcgtacgagggccagcgatcacacagcctcgatctcggccacatgcag
cagcagcagcagggcgagtacaggagcagcatcagcagcgggcaggggaaaggatctccg
ctcgcaccgcacataccccgttcagcctccatgccgatgcagccgcccgcagccggcacc
acacccaatggcggctcgggctccccccgtcggggatcgtcgtttgtgaatccgccgcag
cctgacacagctggtcccgcgaacgcgagccaggccgacatggacaggttcaggtcgata
gtagacttgatcgccatccagccgcaaaagacctatgtcaccagtccgccagagctggaa
atgatccttgcgaggacgagcgggggaggacagccaaagcagggccagcccgggagtgcg
acaaatgactgggatgccgtctggctccagctgtccggcatttctctatcaatgtggtct
atgaaggaaacacgggctgctgctgccaagggcgacaaggtgcccccgacctactttaac
attaccgactcgtctcttgagctcctcgctccccttcctccgcctcctcaccgaccaaat
tcacatccccaccactttgtcttttctctcaatacagctggctccaatcggctgctattc
tcttgcccgacagaacgggatctcgcgcggtgggcgacaggtctccgactagccgcgtgg
gaacgcgcgaggttggaagaaatctacaccggtcatctcgttcaatcgggcgggcgcgag
ccccctgttgaagttggtaaaggccgatcgcggatggaaggatgggtcagagtccgagtt
atgggcgggacagagtggcggcgtctttggctggtgttgagtacaccaagagaaggcaag
gaagaagagaaaaagtccaagcgaagaagtttctttgggatgggaggcagagaagaagag
caggtcccttcagaaccaaataccggtatggtcatggccagcttctatacagaacagagg
acatcgaagaacaagaccagtgtggtacccattttgacaataaccaacgtctcgcaaacc
tatgccgtcttccccgaaaggctcgaggtcatgtctcaatccaacttgttcaaggtggtc
gggcggataagcggggagatggtcaccgtggaaggacgtcttcgagattctggttgggca
cttctcatgcccgaacaccctgagaacgcaggtttccacgatgcgttcaagctttatggc
agacctgaaaagtacgtttgggatatcaaagacccaaaaggtctttttttcgcttatcct
caaggacaagatcgccttaatttattcttggatatcgaggaagctctccatggcgatctc
cgcgtaaccacgctcgctggcgttcggtccaagtttgtctcgctcgttcatcgacgccag
cactcgaaccaaaaacggcccaaagacgagaatactgatcagttttcgggcgaaaatgag
gatcaaggattccaacggcaagacggcaactttagattaccgcctttatcgttcaatgaa
gcgtctcaggatccaaacatgcccaggtctcttacacctataaccgagcgtacggatgtc
gccagtagacaaaatagtacgcgtacttccaattcagcattcaccgtcgttggtcttggt
ggtgcccccggcactggaggatctggcgatcgaaaaaccagtgggactagctccaagcat
ggaagtcaatccagcaacaagcatgaagagcacgagagagatagattaccgcaggtggcg
aatgatatccatcaggtgtttggtcccctgacggaagaacctggtgaagcgtactcaacc
tctgggtccaattcgattgctacccctcgcgttgttcctgcgcctttgccaggtggtggc
ggcggtattcaacggggcggcattccatcgtcttcagtagagtccacttcggtgtactct
caggatacaggggtcacgccgcatcaaagcgccaagccttccccgccaccccccataccc
tctgctcctcccttatcggctgggcctgaggagcagactagtgatgaaggcttgccacat
ccgtctgtcctcactttccccatagctcgcggtcaaaagtctcctcttggtcaacctgtg
attgcaaatcccgatccgcctagcgcttcaccgcctactcctcaaccgccggcgaaacag
cagcttccagttcaacctgctactacttcgcaagtgctttctcctactccacgcaaagcc
tcctcctccggcgataccgtcccacatggaatggagctaagagaagagcctgcggcgatg
tacttgatgaatatggttgaagagacgacacctgtgcctaaacctctggtgcccaaagct
gtttctcctcaaagacctacaatcaataccaactttgatggtcaaggtggacttttaaac
cctatcacaaagcctgtcacaggtgggaaccaagaggcttcggctgttgggaagaaggac
gcactggggaggaaaccctcgggtgcacgagcattacccgcaaaaagaagcgggggaact
cgaatggaaaccattgaggatcggtctgccggttctcagattcaggaggatggacagaca
cagacgcaggctgcagcatcagctgagccctctcgtacgaaagtgtcttcccaaactcct
caagtcgatctgggagatgacgtttcttcctatatgaactatgcggacaacccttccccc
gtcaaaccaaagacggaacctttgcaagtcactaagcccgtggcagcggccaccaaaaca
gtatctcctcctcaagaagagattcgttcaagctttgcaccttccaaagccgcagtggaa
aggcgagccaaagcggagcagactgcgagggaacaggagatggctaagcgtatgcctggt
ggtggaaagaggacggtgaataatgtgaacacgatgtctgggtttgaaagctcggatgag
gaatcggaagaggaaagtgaagaagactctcctatgacgcaaaagagacaagagcaacct
ctttctcgtactgcgtcaaaggcgtctgagcaagcagctcccaacgccccccaacgtacg
acatcgatcaatgccagagctttgccccctgtgccaaggatacagcagccgccagaggtc
agatcgcctgctgaaaataacgagccacgtacgagacgggacagtcagtttagtcagtct
gcaggtcagtatgactcccgtgccagccagttcatggagcgccctcgtcctgcctctcga
actcccagtcctggcagtggtaatgttgcgaatggacgacctatctcgacgctcgtctac
aacaataatggcggatcttaccccattcccggccctcgtcattcacctgcgaataatgcc
ccacctgctactcgtcaaacagtttggaatgccaacttctccactgagcacggtatgcct
gagcagaacaagtctggcaaatttgtggagctagaggaaccttccgttcagctcactaaa
gctttcgcgccacatggattgttgcaggctggtatgcaagataaggaagaccgctctgcg
aagaagcaagaagagctggcaagagagactggtagcagcttgatcaatgtcgccgccaaa
cctcctccccctcaaactgggctggttggtgccgttgccgctcatgaaagggacaggaaa
aatgctggtggtatcggggcgaccttgacagaccgagaaagggaaaagaggctagtcgag
gacaaacaaagagagattgaaagacttcagaaacagcaaatgggacagttcggtggagac
atgtaccctcagaactttggctatcctatgagtcccggccctatgggtatgggtatgaac
atgcccatgatgaacatgggataccccggacagatgaacccttatgtccagcaacaggcc
atgctagctgcccaaatggcgtatcagcagaccatgatggctatgtctcaggcgggatct
caagcaggagatttccccgaccgaactcagtcttcttcccaacttcgctctcgtcaacag
ccaggtgcagatgggcgttcaatatctccgactggcagcatgggcggaccgacatccccc
ccgcctatgggtgttccatccttttatggctacccgcagggaatgggcatgtcccctcaa
atgggtatgggtggtatgggtatgccacccatgcagatgccctggatgatgtctcctggc
gctatgtggggcatggccacccctccgactggaccaggaagtcccatggttcagccgagg
tatgattatatgcagtcaggaaccgcaggaatgggaagcgaatcaagcagtgcgagaacc
aagaatagaggtagtagcggtgaagatcttggtcagcgtgtgaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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