KEGG   Cryptococcus gattii: CGB_C5210C
Entry
CGB_C5210C        CDS       T02232                                 
Name
(RefSeq) hypothetical protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
cgi  Cryptococcus gattii
Pathway
cgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGB_C5210C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_C5210C
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CGB_C5210C
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     CGB_C5210C
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 10187568
NCBI-ProteinID: XP_003192903
UniProt: E6R3J9
Position
C:complement(join(1044292..1044646,1044692..1044901,1044954..1045324,1045377..1045666,1045736..1045841))
AA seq 443 aa
MFYATAGQQATQQPPTSRIAGYPRSGPPGFGVRSSDPNDFPALGSHSQHNSSYIAQNQSG
QGSANASHQNTHLQQQQLYMQQQQQQQQQLGVTPTPPPGISGPTAGASSQSNGGLTEEFP
ALGASSESKDGRMANFLRNPSSVHQPVPSSPSPLPNGTSSASASQSANATPSTNPPHPQS
GMGGPASTTDSWQRQSPRHTEPVVRPVQQILSSPVDRWGLKALLFEIQMHMNKTDRGMMV
FGEDLEELGVDINSEEALYPTFVTPWVEPNSLPPPQIEESFHIPQCYYVHAPPVESKLQN
FAEDTLFLAFYMSPQDVLQLRVAEELFARGWRYHTELQTWLTSPTLATIDLSKADRSSGQ
PNWIRGPFAYLDTRTWVRQRTAEDFTIDANVLELTKRADDVIREEAARKEAQKSPSNVPV
NGQGQVQSQGQQQNQGQTLSYQR
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgttctacgcgacagcaggccagcaagcaacccagcaaccaccaacatcaagaatcgct
ggctacccaagaagcggtcctccggggtttggtgttcggagctctgatccgaacgatttc
ccagctcttggatcacacagtcagcataattcgagctatattgcccaaaatcaaagcggc
cagggttcagccaacgcaagccatcagaatactcacttacaacaacaacagctgtacatg
caacaacaacaacagcagcagcaacagcttggtgtcactcctactcctccgccggggata
tctggtccaacggcgggcgcgtcgtctcaatcgaatgggggtttgacagaagagtttcct
gctctcggggcatcttcagaaagcaaagacggtcgtatggcgaactttcttcggaatccg
tctagcgtacatcaacccgtcccttcctctccttcaccattacccaacggtacaagcagc
gcgagtgcatcccagtccgcaaatgcgaccccttcaaccaatccaccacatcctcagtct
gggatgggtggacctgcatctacgactgactcatggcaaagacagtcaccaagacataca
gaacctgtggtacgacctgtacagcagatcctgagctccccggtggatagatggggattg
aaggcgctgctatttgagatacaaatgcatatgaacaaaacggatcgcggaatgatggtg
tttggagaagatctggaggaattgggtgtggacataaacagcgaggaggcgctctacccc
acatttgttaccccatgggtggaacccaactcattaccgccacctcaaattgaggaatca
ttccacatcccccagtgctactacgttcatgcgcctcctgtagaatccaaattgcaaaac
ttcgcagaagatactctgttccttgccttttatatgtctcctcaagacgttttgcagctc
cgtgtcgcggaggaactgtttgcccgaggatggcgttatcatacagaattacaaacatgg
ctcacctcccctactctcgcgaccattgatctctccaaagccgatcgttctagtgggcaa
ccaaactggatccgtggtccatttgcatacctcgacactcgaacatgggttaggcaaaga
acggcggaagactttaccatcgacgccaatgttcttgaacttaccaaacgggcagatgat
gtcattcgagaggaggcagctagaaaggaggcacagaaaagccctagcaatgtccccgtg
aatggtcaaggccaggttcaaagccagggtcagcaacaaaatcaaggacagacgctttcg
tatcagcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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