KEGG T02232: CGB

Cryptococcus gattii: CGB_C6020W

Entry

CGB_C6020W CDS T02232

Definition

DNA repair protein

Orthology

K10877

DNA repair and recombination protein RAD54B [EC:3.6.4.-]

Organism

cgi Cryptococcus gattii

Pathway

cgi03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cgi03440]

SSDB

Motif

Pfam:

SNF2_N Helicase_C HDA2-3 DUF2439

Other DBs

NCBI-GI:

321253974

NCBI-GeneID:

10187635

UniProt:

E6R1N0

Position

C:join(1180363..1180700,1180751..1180776,1180840..1180912,1180961..1181062,1181111..1181515,1181564..1181642,1181696..1181813,1181862..1181892,1181953..1182021,1182071..1182105,1182540..1182724,1182776..1182848,1182896..1183015,1183060..1183094,1183149..1183537,1183588..1183620,1183675..1183716,1183775..1183923,1183984..1184049,1184100..1184269,1184335..1184355,1184413..1184835)

AA seq 993 aa
MTISMARPRRSLGAIIDSIPSQQEYVPDSCSENSDSDSGREALIPTLKPIPLTPLPSRPT
RSTRELGPESITTVKGKEREEAGAVFGDGKKDKKVHATDDTLSMPVLYFAVQWRKPQFKK
HKTWDGDANIKVEDNRIVMLDEDGNQMATTNVGDKVIKPEAEFKIGGYEVMVDHALQQDQ
FKASTSILNRPKVIPTIKSSGYRPASFTKAFRPPIQKEKFTSTKLSTIEAVEDEHRQSPI
SSLPKRSIPTPAAAQRAVAASSFYTKQSSKPYSERIVLGEKSNKERLEWGGALFNPHAEG
AVVMPRPAEKLAKLKGTTIVDVVIDPILGNLLREHQKEGVKFMYSCVMGMTGAEGEGCIL
ADEMGLGKTLQTIALIYTMLKQSPFANQTSIIGKAIIVCPVTLVNNWRKEFKKWVDRRVN
VLVADVLSGTPVQNDLGEYWAMVDFACPGVLGKYSAFAKHYEKPILKSRTPNCSTKDVEL
GRERANDLAKLSKEFVLRRTAAVLEHYLPPKYEYVIFVAPSLLQLRVLSNLLDPSIVGSF
IRGHGAQSLALIDLMRKISNSPMLLKRKDDELARADDDLGSATSAAISAIPGDTNINDVT
TSGKMLLLDKMLHSIYQSTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQ
ELVDRFNKDKERQGSFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDLQAMARIHRDG
QKRPVYIYRLLTTNAIDEKIYQRQITKTGLSDQMMDHKHSEKQTGKDSFSAAELRDIFTL
NVRTDGCQTHDLLGCQCTETPAGKLRDIAEGEQRSEHLPDNSSGESDSDPNDYPTFVSAN
KYDPEPTPKMRRKAIKEQKNKLAALKHWAHFDPFELASFRGIQDSLLYNVLFDSWETDGV
PLSENVRAYGSLDFEGPYEQDEDDPDSDNEALVPKKRKLGMVQTTAALKKTRTTDEEDTR
FNQRRRNLKSIAESGGTGRVTFVFEKISKSTIA

NT seq 2982 nt +upstreamnt +downstreamnt
atgacaatcagcatggccaggcccaggcgcagcctcggtgccatcatagactcaatccct
agtcaacaggaatatgttccagactcttgctcagaaaactccgattccgattcaggacga
gaagctctcattccaaccctcaaacctataccactcacacctttgccctccaggccaaca
cgctctacccgcgaactagggcctgaatcgataacaacggtgaaagggaaagaaagagag
gaggctggagctgtttttggtgacggcaaaaaagataaaaaggtccatgcgaccgatgac
accttatcaatgccggtcctgtatttcgccgtgcaatggaggaaaccccagtttaagaag
cataaaacatgggatggcgatgccaacataaaggttgaagataataggattgtaatgctt
gacgaggatggaaatcaaatggccactaccaatgttggagataaagtcattaagccggag
gccgaattcaagatcggtggatatgaggtcatggtagatcatgcgcttcaacaggatcaa
ttcaaagctagtaccagtatcctcaatagacctaaagttatcccaacgatcaagagctcc
ggctaccgacctgcatcattcacaaaggcctttagaccgccaatccagaaagagaaattt
acttcaacaaagctctcaaccatagaggctgttgaagatgaacaccgccagtcacccatt
tcttcacttccaaagcgctccattccaacacccgcagccgcccaacgagcggttgctgct
tcatcattctatacgaaacagtcatctaaaccctacagtgaaagaattgttttgggagag
aagagcaacaaggagaggctagaatgggggggagctttattcaaccctcatgctgaaggt
gcagtggtgatgcccaggcctgcagaaaagctggctaaattgaagggcacaaccatcgta
gatgtggttattgaccccatcttggggaacttattgcgtgaacatcagaaagaaggcgtc
aaatttatgtactcgtgtgtcatgggaatgaccggtgcggaaggcgagggatgcattctt
gcggatgagatgggtttgggcaagacactccagaccatcgcactcatttacaccatgctg
aagcagtctcccttcgccaaccaaacgtccattatcggcaaggcgattattgtgtgtccg
gtaacgttggtgaacaattggcgcaaggagttcaagaaatgggtggatagaagagtcaat
gttttggtggccgatgtcttatcaggcacgcccgtacaaaacgatctgggtgaatattgg
gcgatggtcgattttgcttgtccgggtgtgttgggcaaatactcggctttcgcaaagcat
tatgaaaagccaatattaaaaagcagaacaccgaactgttcgacaaaggatgtagagcta
ggaagggaaagggcgaatgacttagccaagttgtccaaggaatttgtcctgcgaaggacg
gctgcagtacttgaacattatttgcctcccaagtacgagtacgtcattttcgtcgctcca
tcccttcttcaacttcgtgtcctttcaaaccttctcgaccccagtatcgttgggagcttc
atccgaggccatggtgcacagtcattagctctaattgatcttatgaggaaaatttccaat
tctcctatgcttttgaaacgaaaagacgacgaattagcacgagcagatgatgatttaggc
tcagccacctccgcagcaatctctgctatccctggcgataccaatatcaacgacgtgact
acgtctggcaagatgcttttgcttgacaaaatgcttcattccatctaccaatccactgaa
gaaaaggttgttgtcgtatccaactggacttctactcttgatttgatccaaggattgtgt
aagctaaagagatataactatctcagacttgatggtagtactccgccgaagcagaggcaa
gagttagttgatagattcaacaaagataaggaaagacaaggaagttttgtttttctgctt
agtgccaaagctggcggagtgggactgaacctgattggtggatcgagattgattttgttc
gacagcgattggaatccctctactgatctccaagctatggcccggatacatcgcgacggg
caaaagcgcccagtctacatctatcgccttctcacaacgaatgctatcgacgagaaaatt
tatcaacgtcagattactaagacgggattatcggatcagatgatggatcacaagcattca
gagaaacagacgggcaaagactctttctcggcagcagagttgagggacatttttacccta
aatgtgcgaacggacggttgccaaacacatgacttgctgggctgtcagtgcacggaaact
cctgcaggcaagttgagggacattgccgaaggggagcaacgttcagagcacctgccagat
aactcgtctggagagagtgatagtgatccaaacgattaccccacttttgtcagtgccaat
aaatatgatcccgaacccactcccaaaatgcgtcgcaaggcaattaaagagcagaaaaac
aagctcgctgcgctaaaacactgggctcattttgatcctttcgaactcgcatccttccgt
ggcatccaagactctctcctgtacaacgtacttttcgattcatgggagaccgatggtgtc
cctttatctgaaaacgtcagagcgtatggctctctggacttcgagggtccctatgaacag
gatgaggatgaccctgactcggataacgaggcgttagtgcctaaaaaacgcaaattgggt
atggttcaaactacagccgcgctgaagaagacaaggactacggacgaggaagatacgagg
ttcaatcaaagaaggcgcaatctgaaaagcatcgcggaaagcggaggaactgggagagtg
acatttgtatttgagaagatatcaaagagtactatagcctaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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