KEGG   Cryptococcus gattii: CGB_C7420C
Entry
CGB_C7420C        CDS       T02232                                 
Name
(RefSeq) RNA binding protein
  KO
K12876  RNA-binding protein 8A
Organism
cgi  Cryptococcus gattii
Pathway
cgi03013  Nucleocytoplasmic transport
cgi03015  mRNA surveillance pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_C7420C
  09122 Translation
   03013 Nucleocytoplasmic transport
    CGB_C7420C
   03015 mRNA surveillance pathway
    CGB_C7420C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_C7420C
   03041 Spliceosome [BR:cgi03041]
    CGB_C7420C
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CGB_C7420C
Spliceosome [BR:cgi03041]
 Complex C
  Other components
   EJC/TREX
    CGB_C7420C
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 RRM_3 RRM_occluded RRM_7 RRM_5
Other DBs
NCBI-GeneID: 10187951
NCBI-ProteinID: XP_003193042
UniProt: E6R1Z7
Position
C:complement(join(1483862..1483946,1484008..1484102,1484222..1484358,1484441..1484495))
AA seq 123 aa
MADVEMNGKSKDLSWAAKSVEGWNIFVTGLHEEATEEDVQDFFADFGSIKQVNMPLNRRT
GYVMGYAIIEYNDRENAERAIAEADGTTFLEQTIHVTFAFAKAPQGGAQRREGKGRELSP
DRR
NT seq 372 nt   +upstreamnt  +downstreamnt
atggccgacgttgaaatgaacggcaagagcaaggacctttcttgggccgccaagtctgtc
gaaggatggaatatctttgtcactggactccatgaagaagctaccgaggaggacgttcaa
gatttctttgcggactttggatctataaagcaggtcaacatgccattgaacagacggacg
ggttacgttatgggctatgcaatcattgaatataatgaccgagaaaatgcggagagggca
attgcggaggccgatggcaccacttttcttgaacaaacaattcacgtcacttttgcattc
gccaaggctcctcaaggaggtgctcaacggagagaaggcaagggacgagagttgtcacca
gacaggagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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