KEGG   Cryptococcus gattii: CGB_D6380C
Entry
CGB_D6380C        CDS       T02232                                 
Name
(RefSeq) tRNA ligase,putative; Trl1p
  KO
K14679  tRNA ligase [EC:6.5.1.3]
Organism
cgi  Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cgi03016]
    CGB_D6380C
Enzymes [BR:cgi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.3  RNA ligase (ATP)
     CGB_D6380C
Transfer RNA biogenesis [BR:cgi03016]
 Eukaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    CGB_D6380C
SSDB
Motif
Pfam: RNA_lig_T4_1 tRNA_lig_kinase tRNA_lig_CPD
Other DBs
NCBI-GeneID: 10191418
NCBI-ProteinID: XP_003193756
UniProt: E6R4E0
Position
D:complement(join(1455425..1456698,1456749..1457466,1457517..1458104,1458158..1458787))
AA seq 1069 aa
MRMGMRLSAAKRYAETSRYNSAAVGGRGQMSGGSGQSGGGGEGKILPVSVLGHYVNWSCS
GRLLTRSPPRMSLAQPQPQSQPSTYASKHPESTSHLLNALRNLHATDPKAIRTTVHRYPA
ALYTHGQNDHARDRLITSWKMTEHMYFKKSLVFPTLARGLFTEEVLEGDPVLPSGECSDQ
ARSDPDALKERIVLRGYDKFFNIGEVAWTEWDAMKQHTQGPYYLTLKSNGCLILISALSP
THLIVASKHSLGTTTTTEGVDLPGTEKPIDKEKPAQECGKSALGPEISQIRTISSFPPTV
RSLDEPFKDLTLEQSQASQSVSKNALKKAEKAALKHAQKQKNEDKSGNSAQSIAAEEKKE
IKEHEEAQQHAEVGRRWLKRTLESSGKTEKELAQKLWEKNLTAVLELCDDSFEEHVIATP
EHWTGLHLHGLNSNTPHFSTSSPSDVAAFAKEFGFIQTKYIQLESLEQVKSFTTDLAQSG
TWEGEMIEGFVVRCTVKNGQDGMIQGAPPYRANSPFFFKVKFEEPYLLYRQFREITRVML
PLLESTNTQKKEEIWKKVRSRAKRPEVKVYSTWVGKMMEKEPELFEDYNRGVIRVRERFL
KWAEEDGKKQWDDARAGKIDKEQRSGNRDGLPRKWIVVPAAIPGCGKTLLGVALARIFGL
AHTQSDDITAKRTAPTFIKNVTDLLVTNDIVFADRCNHIPKHYDELAKIAEDRKLQKFDT
RLICITWDLDTFPYYRLLRILSDRVVARGENHQTLRPDPTLDAEHEAVVGKFIRDYTPPD
PAVFEDIISVNVMDSAEVTLTKAVQGLVKFLGLTTPSEDVINQGLEAASLYKPTTPYHPA
ARHGKSTRYFAVAPEINLYELTSKAIGPFRDTEKGQSAWLFLDELYKRGRITAKPHVTLT
HENNVKAEMEARSRTGACESKDDSELVQSPGPEEILWETCKSIATSKYPPLYSFSLTHLV
WDGRTMAFCLSGLSPMASSAEDGAVSPSVCHDLDNVLPQATRTYLHVTVGTRDVDVPAFE
SRSLVKIVRERLEADEQEGEIEEVVANGGSVKWMKIGPARSEGRIRGMA
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgagaatggggatgcggctgtctgcggcgaagaggtacgcagagacctctcgctacaat
tcggcagcggtgggcgggagaggccaaatgtccggtggatcgggacaaagtggaggtgga
ggggaggggaagattcttcctgtttctgtactcggtcattatgtaaattggtcatgcagt
ggtcgtttgttgactcgctcgccgccccgcatgtctctcgcccagccccagccccagtcc
cagcctagcacctacgcctcgaagcaccccgagagcacctcccacctcctcaatgccctc
cgcaacctccacgctacagatcccaaggccattaggaccaccgtacaccgctacccagca
gctctatacacccatggccagaatgaccacgccagagaccggctcataacaagctggaaa
atgacagagcatatgtactttaaaaaatctctcgtatttcccacccttgccagagggcta
tttactgaagaagtactggaaggagaccctgtgcttccttcgggagaatgttccgaccag
gccagaagtgacccagatgccctcaaggagagaatagtgctcagaggctacgacaagttc
tttaacattggtgaagtcgcttggacagagtgggacgccatgaaacaacacacccagggg
ccgtattaccttacgctcaaatctaacggctgcctgatcctcatatccgctctttctccc
acccatctcattgtggcctccaagcattcccttggtaccactacaactactgaaggcgtt
gatttgcccggtacagagaaacccatcgataaggaaaagccagcccaagaatgcggaaag
tcggccctgggaccagagattagtcagattcgcaccatatcgtcctttcccccgacagtt
agatcccttgatgaaccttttaaagatcttactctagagcaatctcaagcgagtcaatca
gtctcaaaaaacgctttgaaaaaggccgagaaggctgctttgaaacacgcacaaaagcag
aagaatgaggataagtcggggaacagcgctcagtccattgcagcggaggaaaagaaggag
ataaaggagcatgaggaagcacagcaacatgcagaggtcggaaggcgatggttaaaacga
acactagaatcaagcgggaagacagagaaagagttggcgcaaaagctgtgggagaagaat
ttgactgcagtgcttgagctttgtgacgattcctttgaagagcacgtgatagctactcct
gagcactggactggacttcacctccatggcctcaattcaaacaccccacacttctctacc
tcgtctccatccgatgtggcggcctttgcaaaagagtttggattcattcagaccaaatat
atccagcttgaatctctcgaacaggtcaagtcgttcacaaccgaccttgcacaaagcggc
acctgggaaggcgaaatgattgaaggttttgtagttcgctgtacggttaaaaatggacaa
gatggcatgatccagggcgctcctccatatcgggccaattccccatttttcttcaaagtc
aagtttgaagaaccgtaccttctctatcgccagttccgcgagataacccgtgtcatgctt
cctttgttggagagcactaatacccaaaaaaaagaagaaatttggaaaaaagtacgctct
cgtgcgaaaaggccggaggttaaagtttattcgacatgggtaggcaagatgatggagaaa
gagcccgaactatttgaggactataaccgtggggtaattagagtccgagaaaggtttttg
aaatgggccgaagaagatggcaaaaaacagtgggatgatgcgagggcgggtaagattgac
aaggagcaaaggtctggtaatcgggatggactaccgagaaagtggatcgtagtacctgcc
gccattcctggttgcggtaaaacattattgggtgttgccctcgctagaatatttggtttg
gcccatacgcagagcgatgacattaccgccaaaaggaccgcacctactttcatcaaaaat
gtgaccgatctccttgtcacaaacgacatcgtttttgcggacaggtgtaaccacatcccc
aagcattacgatgaactcgccaagatcgcagaagacaggaaacttcagaagttcgatacc
cgtcttatctgtatcacttgggacctggacactttcccgtactaccgccttcttcgcatc
ctttctgatcgagtagtcgcccgtggagaaaaccatcagactctgagacccgaccctacc
cttgacgcggaacacgaggccgtggtaggaaagttcatcagagactatacaccacctgat
cctgccgtttttgaggacatcatcagcgtcaatgtgatggatagcgccgaggttacatta
acaaaggctgtacaaggtctcgtgaaatttcttggtttaacgacgccatcagaagatgtg
atcaaccaaggccttgaagctgcaagcttgtacaagccgactacgccatatcatcccgca
gctcgacatggcaaatcaacccgttactttgccgtggcaccagaaataaacctttacgaa
cttacctccaaagctatcggaccctttagagatactgaaaaaggtcaaagcgcttggtta
ttcttggacgagttatataagcgtgggaggattaccgctaaaccacacgtaactctgacg
cacgagaataacgtaaaggctgagatggaagcgagaagtaggactggagcatgcgagagc
aaggatgattcagaacttgttcagtctcctggaccagaagagattctatgggagacttgc
aaatctatcgccacttccaagtatcccccgctctattctttttctctcacccatcttgta
tgggatggtcgtactatggcattttgcctttctggcttgtctcccatggctagttctgca
gaagacggcgccgtttcgccatctgtatgccacgatctggataacgtgttaccacaggcc
acgagaacatatctgcatgtgacagttggcactagagatgtggacgtgccagcatttgag
agtcgaagcctagtcaaaattgtcagagaaagactggaagctgatgagcaggaaggagaa
attgaagaagtcgtcgcaaacggaggtagtgtaaagtggatgaagattggccccgccaga
agcgaaggcagaattcgggggatggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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