KEGG T02232: CGB

Cryptococcus gattii: CGB_H3700W

Entry

CGB_H3700W CDS T02232

Definition

DNA ligase

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

cgi Cryptococcus gattii

Pathway

cgi03030	DNA replication
cgi03410	Base excision repair
cgi03420	Nucleotide excision repair
cgi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:cgi03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:cgi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cgi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cgi03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

321262088

NCBI-GeneID:

10185600

UniProt:

E6RB09

Position

H:join(811250..811256,811304..811441,811499..811814,811866..811934,811985..812156,812215..812355,812411..812512,812565..812727,812778..812853,812912..812997,813058..813269,813327..813509,813565..813795,813852..814199,814250..814417)

AA seq 803 aa
MSDTDSPVKANVRKKRTVILSDDEDEGLSPPVTKKQLSSPRHSHASDEETEPPRKIAKTS
SKVAPIFAPKEKREKPPSKASSTSPKAPTKKTEVKNKDEKPLASIFTKSVRKPEPKDDDE
VSDEVKQKGKDEEEEDEVYDEIEDKQEGEAAVKLASIFTKNQKSVPVADKGWKDGEAVPY
SALVSTFEKIEATTKRLEILELLTQFLLVVAKRDTATDTKGSMLLKVVYLCINRLCPDYM
GIELGIGESLLVKAIAESTGRAMPKIKEDLKKEGDLGKVATNSRNTQSTMFKPKPLTVPY
VFQCLTEIAKATGNASQAKKVGIIKKLLAACQSTEAKFIIRSLEGKLRIGLADKTVVVAL
AHAIVLKTIGDKKPSPEKLAIMLEQGAETVKAVYSELPSYDLVIPALLQDGVEGLRKHCK
LTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGTISVFSRNSEN
MSAKYPDLIDQIPRALKPTAKTFVIDAEAVAYDLETKKILPFQDLSRRKRKDVKAEDITV
RVHIFAFDLLYLNGESLLAKELKERRRLLQEHFQPVESEFAFAKSSDGSTSEEIQAFLEE
SVKDGCEGLMVKMLTSEASTYEPSRRSMNWLKLKKDYLSGVGDSLDLVVVGAYHGKGKRT
AVYGAFLLACYDPDSEHYQTICKIGTGFSEEILTKFYELLKPLELGVVRGDIEVGGAKPD
VWFEPRVVWEVLTADLSLSPVYAAAHGVIDSRGISLRFPRFIRIRDDKSADEATTAEQVC
EFYQRQVSASGKKGAGPDVDDFW

NT seq 2412 nt +upstreamnt +downstreamnt
atgagtgatacagactctccagtgaaggctaacgtcaggaagaagcgaacggttatcctg
tcggatgacgaggacgaaggacttagcccacctgtgaccaaaaagcagctttcgtctccc
agacattctcatgcatctgatgaggagacggagcctccccgtaaaattgcaaaaacatca
tccaaagtggcgcctatcttcgctccaaaagagaagagagaaaaaccgccctccaaggcc
tcatccacttcgcctaaagcacccaccaagaagacggaagtaaagaacaaggatgaaaaa
ccacttgcatcaatattcacaaaatcggtacgaaagcctgagcctaaggatgacgacgag
gtatccgatgaggtgaaacaaaaggggaaagatgaagaagaggaggatgaggtatatgat
gagattgaggataagcaggaaggagaggccgctgtcaaactggcttcgatctttaccaag
aaccagaagtctgtccccgttgctgacaagggctggaaagacggtgaagcggtcccctat
tccgctctcgtgtcaacctttgaaaaaattgaggctactactaagcggttagaaattctc
gaacttttaacccagtttttgctcgttgtcgccaagagagatacggccacagatactaaa
gggtctatgcttctcaaagtggtctatctttgtatcaacaggctatgccccgactatatg
ggtatcgagctcggtattggggaatcattattggtcaaggccattgcagagagcacaggg
cgggccatgcccaagatcaaagaagatttaaagaaggaaggagatctcgggaaggtcgcc
acgaactctagaaacactcaatcaaccatgttcaagcccaaacctctgacagtaccatat
gtcttccaatgtctcactgagattgcaaaggctaccgggaacgcgtctcaagcgaagaaa
gtaggcatcattaaaaaactacttgctgcctgccagagcaccgaggcgaaattcatcatc
cgatctcttgaaggaaagttacgaatcggtcttgccgacaaaacggtcgtggttgccttg
gcccacgctatcgttctgaagaccattggtgacaaaaagccctcgcctgagaaacttgct
attatgctggaacagggcgctgaaactgttaaagctgtctatagtgaacttccttcatat
gacttagtaattcctgctcttctccaagatggcgtagaaggtttgaggaaacattgcaaa
cttactccaggcgtccctctcaaacctatgcttgccaagccgacgaaagccatcacagag
gttcttgaccgtttcgaaggcaaggaattcacttgcgagtacaagtatgatggagagcgt
gcgcaggtccacctgttggaagatggtactatttctgtgttcagcagaaattcagaaaac
atgagtgccaagtatcctgatctgatagatcaaataccgagggctttgaaacccactgcc
aagacgtttgtcatcgatgccgaagcggttgcttatgacttggaaaccaagaagattctg
cccttccaggatctcagtaggcgaaagcgaaaggacgtcaaggccgaagacatcacagtg
cgagtacatatctttgcgttcgatttgctctatctgaatggagagagtctcctcgctaaa
gagctcaaagaaagacgacgactcttacaagagcacttccaacctgtggaatcggagttt
gcctttgccaagtcatcagatggcagcacgtcagaagaaattcaggcgttcctcgaggaa
agtgtgaaggatgggtgtgagggtctgatggtgaagatgctcactagtgaggcatcaacg
tatgagcccagtagaagaagcatgaattggctcaagctcaagaaagactacctttcaggt
gttggagactctctcgatcttgttgtcgtaggggcatatcatggcaaaggcaaacgtact
gcagtctatggtgctttcctcctcgcatgctatgaccccgattcggagcattaccagact
atctgcaagatcggtaccggtttctccgaagaaatcctcacaaaattctacgaattactt
aaacctttagaattgggagtcgtgagaggagatatagaggttggaggagccaagccggat
gtatggtttgagcccagagtggtctgggaggtcttgacggccgatttgagtttaagtccg
gtttatgcggcggcgcatggtgtaatcgattcgcgaggaatctcgctccgtttccctcga
tttatcaggatcagagacgacaaatccgctgacgaagccacaacagctgagcaggtctgc
gaattctatcaacgtcaggtttcggcaagtggcaagaaaggagcggggccggatgtggat
gacttctggtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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