KEGG T02232: CGB

Cryptococcus gattii: CGB_N1600W

Entry

CGB_N1600W CDS T02232

Definition

subunit of TFIIH and nucleotide excision repair factor 3 complexes

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

cgi Cryptococcus gattii

Pathway

cgi03022	Basal transcription factors
cgi03420	Nucleotide excision repair

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:cgi03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cgi03420]

SSDB

Motif

Pfam:

Tfb2

Other DBs

NCBI-GI:

321265552

NCBI-GeneID:

10186516

UniProt:

E6RG20

Position

N:join(326636..326754,326835..326951,327005..327133,327185..327400,327450..327579,327618..327909,327969..328229,328288..328469)

AA seq 481 aa
MVQPSFSAPKKDVSKQASLTSALDIFLDNQHQSYFEELYRLLPPVCRQIILHALWSHHPL
RVTDVKLLLQMDVHAPLEECDEVMRPAINRKVLHPMHYKKQKMQWSLNDSFKRGLRNALT
GLGASNSFGVPFERHQATDLDLPSKDELVAYGEETFESILKYMVSSGLGTEFSGSRPQPE
VLQLLHASGLMTDPGDMSRRNPNIYRLTITSKGFQFLLEKRQTQLWEILMYYLSAKEANS
ERSSEVLSMFFSLGCMQLGQDYSASNSFPHAQEALNDLAQYGFIYKPSPDSDQFWPTHLA
TSLCSGDASAIQSQSADDKRFLILETNYKIYAYTSNELEIAILNLFVDIRIRYPNLVVGK
LDRQHVKAAMEKGISARQIIAYLSSHAHPQMYNSPPPLLHPTIVDQLHLWDRERNRLQTE
ETVMYEFFSKELFDDTVNEAKANAALQHAATSQKLLFIEPHTKPAITEFVKQRQNVLRGG
Y

NT seq 1446 nt +upstreamnt +downstreamnt
atggtacaaccttccttttcagcccccaagaaggatgtttccaagcaagcatcactgacg
tctgccctcgatatatttctcgataatcagcaccagtcgtatttcgaggagctctacaga
ttactgccgccagtatgccgtcaaattatcctccatgccctgtggtcccaccatccatta
cgagtgaccgatgtcaagctgcttctccagatggatgtccacgctcctttagaagaatgt
gatgaggtcatgagaccagctataaacagaaaagtcctccatccaatgcattataagaag
cagaaaatgcagtggtccttgaatgattcgttcaagaggggcctcagaaacgccttgaca
ggattaggagcatcaaactctttcggtgtaccctttgaaagacatcaggcaactgacctt
gatcttccctctaaggatgagctagtggcatatggcgaagagacatttgagtctattctc
aaatacatggtgtcttccggtctcggcacagaattctctggatccaggccacagcccgag
gttctccagcttttacatgctagcggtctcatgacggatcctggagatatgagcaggagg
aatcctaatatatatcgactcacaatcacttccaaaggattccaatttttgctggagaaa
aggcagactcagctgtgggagatactaatgtactacttgagtgccaaagaagcaaactct
gaacggtcatccgaggtcttgtcgatgttcttctctcttgggtgtatgcaactaggacaa
gactattctgcatccaactcttttcctcacgctcaagaagctctcaacgatctcgcgcaa
tacggcttcatctacaaaccatcgcctgacagcgatcagttttggcccacccaccttgcc
acttctttgtgttccggcgacgcttccgccattcaatcgcagagtgcagacgacaagcgt
ttcctcatcttggaaaccaactacaaaatttacgcatatacttcaaacgagctcgagata
gccatccttaacctctttgtcgacattcgcattcggtaccccaacctcgttgtgggaaag
ctcgatcgtcagcacgttaaagctgccatggaaaagggtatatcagcgcggcagattatc
gcctacttgtccagtcatgctcatccacaaatgtacaactctcccccaccattactacat
cccaccattgtcgatcaacttcatttgtgggatcgagagaggaacagattacagacggaa
gagaccgttatgtacgaatttttcagcaaagaactctttgatgacactgtcaacgaagcc
aaagcgaatgccgctctacagcatgcggctacgtcccaaaagctattattcatcgagcca
cataccaagcctgcgatcacagaattcgtcaagcaaagacagaacgtccttagagggggt
tattag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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