KEGG T01024: CAGL0K05511g

Candida glabrata: CAGL0K05511g

Entry

CAGL0K05511g CDS T01024

Definition

hypothetical protein

Orthology

K12595

superkiller protein 7

Organism

cgr Candida glabrata

Pathway

cgr03015	mRNA surveillance pathway
cgr03018	RNA degradation

Class

Genetic Information Processing; Translation; mRNA surveillance pathway [PATH:cgr03015]
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:cgr03018]

SSDB

Motif

Pfam:

AAA_17 AAA_33 AAA_18 FAM150

Other DBs

NCBI-GI:

50292065

NCBI-GeneID:

2890489

UniProt:

Q6FMS9

Position

K:complement(539944..542127)

AA seq 727 aa
MSRLEELARQRRLKKAGSESSESSKNYEGTSKSASLLEKLRNRKKTASESPHNSEANTEI
ANHGSQAALNQTSGKVRSTPIKTSSSSTLGSKLRELRSRKKVEEAKQKESVDVTPEIDSL
PNGQSNKQSRDQLKQQYLVEMAEFKALQGRLNINIDSSKTIRRLSGHSKFLVNSRNKVHK
LYKQKRDMLLTVFYPARNKSARKKSIEGFHKPSPDDIVLAAQEQVFQAVTENVAQLSIKP
IKIKERVSKRFTDNMTDQTKVQKQQLTVEDFINDRNATSFQVPMFGLPGSGKSTILGQLS
FHLGLTTREDIRVIKTDMERMHFRRIDKLDTRLLTTSPFCWVVDETTEERQFGHSNNIKP
LHIKYNDTDIIINEVPGSFDLCSTIETKRYVGNSVIIVVSAELGDYEANFDMKKRLIEKL
IYCNGVGVRRILTIINKMDLIDWDMDRYTVMKHELELIYQQVGIDILKCDFIGTSAITGE
ALTNDGDNRKRMFTKGSFSSLLNVLLSYKLQFKKEVLESSLVNSQEQTLLDSEKLIAIQT
GNKHEQQLSVPFYIERGLILKGQKLKINRTGLEVVVKSIKESLRKKKSVNVAVVGQSVDL
LFEPSEAITSSNINNILTSCNSPKLIETSEFNMKMWSLKNCSKQLDFNNILIFCVGRFLN
ICISNVEQTENNEKLNNFQYIFCRACLKSSENMLAFEPGYESAKSFVLFFENRAIGFGEL
LLNDRSF

NT seq 2184 nt +upstreamnt +downstreamnt
atgtcaagattggaagaattggcccgacagcgaaggttaaagaaagctggtagtgagtct
agtgaatcttcaaagaattatgaaggaaccagcaaaagtgcaagtctattggaaaaatta
cggaacagaaagaaaacagcttccgaaagtccacataactcagaggcaaatactgaaata
gcgaatcatggatcacaagcggcgttgaatcaaaccagtggtaaggttagaagcacaccc
ataaaaacatctagcagctctacattaggatcaaaattgagagaacttaggagcagaaag
aaagtagaggaagctaaacaaaaagaatctgttgatgtgacacctgaaatagatagttta
ccaaacgggcaatcaaataagcaatcgcgggatcaactgaaacagcaatatttagttgag
atggcagagttcaaagctcttcaggggcggttgaatataaatatagactcgagcaagacg
atacgaagactgagtggccattctaaatttctcgttaattcacgaaacaaagttcacaaa
ctttacaaacagaagagagatatgttattaactgtattttatccagccagaaataagtct
gccagaaaaaagagtattgaaggcttccataaacccagtccggatgatattgttctagcc
gctcaagagcaagtattccaagcggtgactgaaaatgttgcacaattatccataaaaccc
ataaaaatcaaagaaagagtaagtaaacgattcactgataatatgactgatcagactaag
gtgcagaaacagcaacttacggtagaagattttattaatgatcgtaatgctacttcattt
caagtaccgatgttcggactaccaggtagtggtaaatctaccattttaggacaattatca
tttcacctaggactaacaacacgagaggacattagagttatcaagacagacatggaacgt
atgcactttcgaaggattgataagttggataccagattgctgacaacttcacctttttgt
tgggttgttgatgaaacgacagaggaaaggcagtttggacattccaacaatatcaaacct
ctgcatataaaatataatgacacggatataataataaatgaggtaccaggcagttttgat
ctttgctctactattgaaacaaaaagatatgtgggaaattctgtaataattgtcgtcagt
gcagaattgggtgactatgaagcaaattttgacatgaaaaagcggttaattgaaaagttg
atttactgcaatggagtcggtgttaggagaattctgactataattaataaaatggatcta
attgattgggatatggacagatatacagttatgaaacatgaattagaactaatatatcag
caagtgggtatcgacattctgaaatgtgattttattgggactagtgcaattacaggagaa
gcgttaactaacgatggcgataatcggaaaagaatgttcacaaaaggcagtttctcatca
ttgttgaatgttctgttatcgtataaattgcaattcaaaaaagaagttttggaatcaagc
ctagtgaatagccaagaacaaacgctattagacagcgaaaaattaatagctatacaaaca
ggaaataagcatgaacagcaattgtctgtacctttttatattgaaagaggtttgatattg
aaaggtcaaaaactcaagataaatagaactgggttagaggtagtagttaagagcattaaa
gagtcactcagaaagaaaaaatcagttaatgtagcagttgttgggcaatcagttgatttg
ctttttgaaccatcagaggcaataacaagtagcaatatcaacaatattctaacttcctgt
aattcacctaagttaattgagacttcagagtttaacatgaagatgtggtctctgaaaaat
tgttctaagcaactggattttaataacatattaattttctgtgttggaaggttcctcaac
atctgtatttcaaatgtagaacaaacagaaaataatgagaaattgaataactttcaatac
atattctgtcgagcatgtctaaaaagtagtgagaacatgcttgcatttgagcctggttat
gaatctgccaaatcttttgtgctattctttgaaaatagggctattggatttggggaattg
ctgctgaatgatcgcagtttttga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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