KEGG   Nakaseomyces glabratus: CAGL0L08206g
Entry
CAGL0L08206g      CDS       T01024                                 
Name
(RefSeq) uncharacterized protein
  KO
K12586  exosome complex component RRP43
Organism
cgr  Nakaseomyces glabratus
Pathway
cgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAGL0L08206g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgr03019]
    CAGL0L08206g
Messenger RNA biogenesis [BR:cgr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CAGL0L08206g
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 2890560
NCBI-ProteinID: XP_449133
UniProt: Q6FKW1
Position
L:complement(907586..908806)
AA seq 406 aa
MTETISVHPVSFPPEVLARISPDLTLQRHLSLGIRPSLRKFDEFRDVQINEETLSRYSEQ
CQFDANDTSNGILGSNVLKSGNTMVITTITGGIIEDAYNNEFGDLDIGEQELLHLEDAPA
DSLSNYTSIYPVVEVERGRVGACTDEEMTISQKLYQSLLYSRVLPKSSLKVKPGVRSTDE
NGISTITYPDGNVNDDEMSNVVQIKKKWSYVLYAKITVFGRTGPVFDLCWNSLIYALQST
KLPMTFIDEKATDLRVSIRTKGRSTTVKETYEIFADPKRYSDLVIKKERIAYSSNFGIIE
LNPEEQILNGEESSENSATPDGTDATDVEMDVVRPEPETVLLADIDTEAEEATINSTVNI
LTDEQGKMCHFSINGGGAIITPELIRNCLTLANERSSDLSRKCLRN
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgactgaaacaattagtgtgcatcctgtttcttttccacctgaggtactggctcgtata
tctcctgatctaacattacaaagacatttatctttgggaattcgaccaagtttacgtaaa
tttgatgaatttcgagacgtgcagataaatgaagaaaccttatcaagatactccgagcag
tgtcaatttgatgccaacgatactagcaatgggattcttggttcaaatgtgcttaagagt
ggcaataccatggttattactacgataacaggtggtattattgaagatgcatataataac
gagtttggggatttagacataggtgagcaagagctcttgcatttggaggatgcacccgct
gattctttgagtaactatacctctatatatcctgtggttgaagttgaaagaggtagagta
ggtgcatgtactgatgaagaaatgactatatctcagaaactttatcaatcactactgtat
tcaagagtgctaccgaagagttcattgaaggttaaaccaggtgtaagatcgacagatgaa
aatggtattagtactataacttacccagatggaaatgtaaatgatgatgaaatgagcaac
gtagtacagataaaaaagaaatggtcctatgttttatatgcaaaaataaccgtgtttggt
agaactggtccagtgttcgatctttgttggaattctttaatttatgctttacaatctaca
aagcttccaatgacatttatagacgagaaagcaaccgacttaagggtcagtatcagaact
aaaggtagaagcactacagttaaggaaacttatgaaatttttgctgatcctaagagatat
tctgatctagttattaagaaagaaaggattgcatattcatcaaattttggtattattgaa
ctgaatccagaagaacaaattctaaatggtgaagagagctctgaaaattctgctactccg
gatgggacagatgcaacagatgttgaaatggatgtggtcaggcctgagcctgagacggtt
cttttggcagatatagatactgaagcagaagaggcaacaattaatagcactgtcaatatt
ttgactgacgagcaagggaagatgtgtcatttttcaataaacggaggtggcgctattatt
acaccagaattgataaggaattgtctcacattagcaaatgagagatcatctgatttatct
aggaaatgtttgagaaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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