KEGG   Caldicellulosiruptor hydrothermalis: Calhy_2424
Entry
Calhy_2424        CDS       T01346                                 
Name
(GenBank) ABC transporter related protein
  KO
K18888  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
chd  Caldicellulosiruptor hydrothermalis
Pathway
chd02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:chd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Calhy_2424
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:chd02000]
    Calhy_2424
Transporters [BR:chd02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Calhy_2424
SSDB
Motif
Pfam: ABC_membrane ABC_tran AAA_22 AAA_21 Zeta_toxin AAA AAA_14 ResIII DEAD AAA_16 nSTAND3 AAA_18 TsaE ABC_ATPase AAA_33 DUF87 SMC_N AAA_30 AAA_28 SRP54 ATP-synt_ab AAA_7 AAA_24 Rad17 AAA_29 DO-GTPase2 dNK AAA_23
Other DBs
NCBI-ProteinID: ADQ08122
UniProt: E4Q973
Position
complement(2535918..2537801)
AA seq 627 aa
MSERQTAPSQMHMRRPRRHGPGPMGPGFVGEKPKDFKTAMKKLIRYLSAYKVSLVAVMVL
AMLSAAFSIAGPKILSKAITKIFEGIMSKISGTGSGIDFEYVGKIILILLGLYIVSALFG
YIQGWIMSGVSMKLTYRLRKEISQKINRLPLKYFESTNQGEILSRITNDVDTLTQTLNQS
LTQIITSTTLVIGALVMMLSINVLMTVVALLIIPLSFSVVALIIGKSQKFFMQQQEYLGH
VNGQVEEAYGGHVVIKAFNAEKKTIEKFNFFNEKLYNAAWKSQFLTGVMMPLMNIIGNLG
YVVVTVLGSYLTIKGTIEIGDIQAFVQYIRSFTQPIAQIANISNILQQTAACAERVFEFL
EEEEEVPDTPNPQIKLESIKGDVEFRNVKFGYRPDKIVINNFSAKIKAGQKIAIVGPTGA
GKTTVVKLLMRYYDVNDGAILIDGHDIREFKREDLRSLFGMVLQDTWLYNGTIKDNIRYG
KPDATDDEVIRAAKLAHADHFIRTLPQGYDTVLNEETTNISQGQKQLLTIARAILKDPKI
LILDEATSSVDTLTELQIQKAMDNLMKGRTSFIIAHRLSTIRNADLILVMDHGDIVEQGT
HKELLQKGGFYAQLYYSQFEKEEELAG
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgagtgaaagacagactgcaccttctcaaatgcatatgagaagaccaagaagacatggc
ccgggacctatgggacctgggtttgtgggtgaaaaacccaaggattttaaaactgctatg
aaaaagctcataaggtatctatctgcttacaaggtttcacttgttgcagtgatggttctt
gcaatgttatctgctgccttttcaatcgcaggacctaaaatcctcagcaaagccatcaca
aagatattcgaaggcatcatgagcaagataagcggcacaggcagcggcattgactttgag
tatgttggtaaaatcattttgattttgctggggctgtatattgtaagtgctctttttggc
tacattcagggatggataatgtctggtgtttcaatgaagctaacgtacaggctcagaaaa
gaaatctcacaaaagataaatagacttccattgaaatactttgaaagcacaaaccaaggt
gagatactttcaagaatcacaaacgatgttgacacactcacacagacattaaatcagagc
ctcacacagataataacctcaacaacattagtcatcggtgcacttgtaatgatgctcagc
ataaatgttcttatgacagtggttgcgctgcttataattccactttctttttctgttgtt
gcgctgataattggcaaatcacaaaagttttttatgcaacagcaggaatatttaggacat
gtaaacgggcaggttgaagaggcatacggcgggcatgttgttataaaagcatttaatgcg
gagaaaaagacaattgaaaagttcaactttttcaatgaaaagctctacaatgctgcatgg
aaatcacagtttttgacaggtgtcatgatgccgcttatgaacatcataggtaatcttggg
tatgttgttgtgacagtacttggtagttaccttacaataaaaggtacaattgagattggc
gacattcaggcgtttgttcagtatataaggtcgttcacacagccaattgcccagattgca
aatatttcgaacatcctgcagcaaacagcagcgtgtgctgagagagtgtttgagtttttg
gaagaagaggaagaggtgccagatacaccaaatccacagattaagcttgaaagcataaaa
ggcgatgtagagttcagaaatgtcaaatttggctacagacccgacaaaattgttataaac
aacttctctgcaaagataaaagctgggcagaagatagcaattgttgggccaacaggtgca
ggtaaaaccactgttgtaaagcttttgatgaggtattacgatgtgaatgatggtgcgatt
ttgatagatgggcatgatataagagagttcaaacgtgaagatttgaggtcgctttttggt
atggtattgcaggacacatggctttacaatggaacaataaaagataatattcgctatgga
aaaccagatgcgacagatgatgaggtgataagagcggcaaagcttgcgcatgcagaccat
tttataagaacactgccacagggttatgatacagtgctcaatgaagagacaacaaatatc
tctcaaggacaaaaacagcttcttaccattgcaagagcaatcttaaaagacccgaagatt
ttgattcttgatgaggcaacaagctctgttgacaccttgacagaactgcagatacaaaag
gcaatggacaatctcatgaaaggaaggacatctttcataatagcccacagactatcaaca
atacgaaatgcagatttgattttggttatggaccatggagatatcgttgagcagggcaca
cacaaagaacttttacaaaaaggcggtttttacgctcagctttactacagtcaattcgaa
aaggaagaagagcttgcgggataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (36)   

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