KEGG   Capnocytophaga haemolytica: AXF12_09975
Entry
AXF12_09975       CDS       T04287                                 
Name
(GenBank) ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
chg  Capnocytophaga haemolytica
Pathway
chg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AXF12_09975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chg03400]
    AXF12_09975
Enzymes [BR:chg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AXF12_09975
DNA repair and recombination proteins [BR:chg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AXF12_09975
    RecFOR pathway proteins
     AXF12_09975
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase AAA_3 TIP49 AAA_16 nSTAND3 AAA_14 Rad17 RNA_helicase AAA_PrkA AAA_33 AAA_18 Bac_DnaA NB-ARC TsaE AAA_28 NACHT NTPase_1 AAA_17 AAA_24 Sigma54_activ_2 AAA_11
Other DBs
NCBI-ProteinID: AMD85809
UniProt: A0A0X8JBG7
Position
complement(2229764..2230786)
AA seq 340 aa
MNQHLDPNKDNYSAQELDIERALRPLSFDDFAGQEAVLENLQVFVKAANMRGEALDHTLF
HGPPGLGKTTLAHILANELGVGIKITSGPVLDKPGDLAGLLTNLQERDVLFIDEIHRLSP
VVEEYLYSAMEDYKIDIMIESGPNARTVQINLNPFTLVGATTRSGLLTAPMRARFGIQSR
LQYYTTELLADIVQRSASILKVPIEMEAAIELASRSRGTPRIANALLRRIRDFAQIKGDG
KIDIEITRFGLKALNVDAHGLDEMDNKILTTIIDKFKGGPVGITTLATAVSESAETIEEV
YEPFLIQQGFIVRTPRGREVTELAYKHLGRVHPALQGSLF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaatcaacatttagatccgaataaagataattattcagcgcaggagcttgatatagag
cgcgctttgcgtccgctgtcgtttgatgattttgcgggtcaagaggctgtgcttgagaac
ttgcaggtatttgtgaaggcggcgaatatgcgaggagaggcgcttgaccatacgcttttt
cacggtccgccaggtttgggcaagacaactctggcgcatattcttgccaatgagcttggg
gtgggcattaagattacttcgggtcctgtacttgataagcctggagatttagcgggattg
cttaccaatttgcaagagcgagatgtactgtttattgatgaaatacaccgccttagtcct
gtagtggaagagtatctttactcggctatggaggactacaaaatagatataatgatagag
tctgggcctaatgctcggacggtgcagatcaatcttaatccgtttactttggtgggggct
actacgcgttcgggtttgcttacagcaccgatgcgagcacgttttggcatccaaagtcgc
ttgcagtattacacaactgagctgttggcagacattgtgcaacgcagtgcttctatccta
aaagtgcctattgagatggaggcggctattgaactggcgagtcgcagtcgaggaacacca
cgtattgccaatgcactactgaggcgcatacgcgattttgcgcagattaagggtgatggt
aaaatagatattgagatcacacgctttggacttaaagcactcaatgtggatgcacacggc
ttggatgagatggataacaagatactgaccactatcattgataagtttaagggaggtcct
gtggggattactacccttgctacggcagtgtcggagagtgcagagaccatcgaagaggtg
tatgaacctttcttgattcaacagggttttattgttagaacaccacgtggacgtgaagta
acagaattagcctataagcacttaggcagggttcatccagcacttcaagggagtttgttt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

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