KEGG   Corynebacterium humireducens: B842_02930
Entry
B842_02930        CDS       T03576                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
chm  Corynebacterium humireducens
Pathway
chm03420  Nucleotide excision repair
chm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:chm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B842_02930
   03430 Mismatch repair
    B842_02930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chm03400]
    B842_02930
Enzymes [BR:chm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B842_02930
DNA repair and recombination proteins [BR:chm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B842_02930
   MMR (mismatch excision repair)
    Other MMR factors
     B842_02930
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: AJE32439
UniProt: A0A0B5D9S5
Position
588442..591705
AA seq 1087 aa
MPDHHAPKVTPELLSAWLGQEHRPTPQQSAIIGAPPGPLLVVAGAGAGKTETMAARVVWL
VANGYVTPDQILGLTFTRKAAQELAARIRHRLGVLAGIPKISQLDPSGQLADDLAHLAPT
VSTYDAYAAQLVREYGLLVPVEPAGRMITAAELHGIAHRVVSDYRGRHSSTNQVKTVTER
VLGLITEMGNAVAQEEDVVEETLAFIRELESLPPYGKKAPDYFTKDQQTWLKAQRERLDH
FPLIHELRAELASLGVTTFNEQMSVAARLASTHASVGESQRRRFKVVMLDEYQDTSHSQR
VLLSSLFGGEDRDITVTAVGDPMQAIYGWRGATSENLREFVNDFPADGAPAPKRQLTTSW
RNPPEILDLANGISGQLLGTGPDRAVEPLDPRPGAPTGDVALGYFRTREEEMDFVADRLA
AEFHAKQEAKAAAASIRDEEERRKALKKATFTGAVLVRKNRHTADIAHALEVRGIPYEIF
GLGGLLSLPEIADVVAVATMLVRPQDSPAALRVLTGPMVGLGLSDLVALRNRARNLTAGG
EGHTRHDIDPDLPAEDRLRAQLAALVDEPPEQVSGLTDAVADLGELSRYSEEGVRRLKRL
SSQLRRLRTNSLSKSLPDLFADIIEVFGVRTEVLTRPGPTGAVNLDAFLDMVAAYPGDNL
GALLDYFDLAREHEDGLAPGDAAVKDECVQIMTVHKAKGLEWDVVSVIRADQSTFTGNTE
TFLTQSQRIPDADDVDTTEAENRSQFSRIYGEYREGKKAELAEENARLFYVGITRSERVL
TVTASPAGRSPKPYEHLETLRRLAPDAVVAWETDADVEKQEQEPENGTFPQLDPQPAALA
GAELVRQALAELPAPAAGETFDFWEAEVTALIEEHEAAQAPVVEVALPGELTATDLVNLR
ADPLQFARRQRRPVPFRPNQYAKRGTAFHEWLEDRFGATALLDEDQLPGLDEQPVDADDL
VKLKESFLASEWAERTPEFVEQPFEVTIGGSVVRGRMDAVFRDPQDPEGWLIVDWKTGRP
PSGPDRKAAIIQLAVYREAWRRIIGEDVPVRAAFHYVGWGETLEPHDLPGHAELEQMLAE
AVVDKEA
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgcctgaccaccacgcacccaaggtgaccccggaactgctctccgcctggctcgggcag
gagcaccggccgactccgcagcagtccgcgatcatcggcgcaccacccggcccgctgctc
gtcgtcgccggcgcgggtgccggaaagacggagaccatggccgcccgcgtcgtgtggctg
gtggccaacggctacgtcacccccgaccagatcctcggtctgacgttcacgcgcaaggcg
gcccaggaactcgccgcccgtatccggcaccgcctcggcgtgctggcgggcatcccgaag
atcagccagctcgacccctccggccagctggccgatgacctggcgcacctggcacccacc
gtgtccacctacgacgcctacgccgcccagctggtccgcgagtacgggctcctcgtgcct
gtggaaccggccggacgcatgatcaccgccgctgagctgcacggtatcgcccaccgggtc
gtctccgactaccgcggcaggcactcctcgacgaaccaggtcaagaccgtcaccgaacgc
gtcctgggtctcatcaccgagatgggcaacgccgtcgcgcaggaggaggacgtcgtcgag
gagaccctggcgttcatccgggagctcgagtccctgccgccgtacggaaagaaggcaccc
gactacttcaccaaggaccagcagacgtggctcaaggcgcagcgcgagcgcctcgatcat
ttcccgctcatccacgaactgcgtgctgaactggcctccctcggagtgaccaccttcaac
gaacagatgtcggtggccgcccgcctggcctccacccacgcgtcggtgggggagtcccag
cgtcgtcgcttcaaggtcgtcatgctcgacgagtaccaggacacctcccattcccagcgc
gtcttgctgtccagcctgttcggcggtgaggacagggacatcaccgtcacggcggtcggc
gatcccatgcaggccatctacggctggcgtggcgccacctccgagaacctgcgcgagttc
gtcaatgacttccccgcggacggtgctccggccccgaagaggcagctcaccacctcctgg
cgcaaccccccggagatcctcgacctggccaacggcatctcggggcagctgctcggtacc
ggccccgaccgtgcggttgagcccctcgacccacgccccggagcgcccaccggggacgtg
gccctcggctacttccgtaccagggaggaggagatggacttcgtcgccgaccgtctggcc
gcggagttccacgccaagcaggaggccaaggccgcggcggcctccatccgggacgaggag
gagcggaggaaggcgctgaagaaggcgaccttcaccggtgctgtgctggtgcgcaagaac
cggcacaccgccgacatcgcccatgccctggaggtccggggcatcccctacgagatcttc
ggtctcggtgggctgctcagcctgccggagatcgccgacgtcgtggctgtcgccaccatg
ctcgtccggccccaggactcccccgcggccctgcgggtgctcaccggcccgatggtcggt
ctgggactgtccgacctggtggcgctgcgtaaccgggcacgcaacctgaccgccggcgga
gaggggcacacccgccacgacatcgaccctgacctgccggcggaggaccgtctgcgcgcc
cagttggccgcactggtcgacgaacctccggagcaggtctccggcctgacggacgccgtc
gcggacctgggggaactcagccgctactcggaggagggggtgcgccgtctgaagcggctc
agctcgcagctgcgccgtctgcgtacgaacagcctcagcaagtccctgccggacctgttc
gccgacatcatcgaggtgttcggcgtccgcaccgaggtgctcacccgaccgggccccacc
ggtgccgtcaacctggacgcgttcctcgacatggtcgccgcctacccgggggacaacctc
ggcgcgctgctcgactacttcgacctggcacgcgagcatgaggacggactcgctccggga
gacgccgcggtgaaggacgagtgcgtccagatcatgaccgtccacaaggccaagggactg
gagtgggacgtcgtcagcgtcatccgggcggaccagtcgaccttcacgggtaacacggag
accttcctcacccagtcgcagaggatccccgacgcagacgacgtcgacacgaccgaggcg
gagaaccggtcgcagttctccaggatctacggcgagtacagggaggggaagaaggcggaa
ctggcggaggagaacgcccgtctgttctacgtcggcatcacccgctccgaacgggtactc
accgtcaccgcctccccggcgggtcgttcccccaagccctacgagcacctggagaccctc
cgccggctcgcgcccgacgccgtggtggcctgggagacggacgcggacgtcgagaagcag
gagcaggagccggagaacggcacgttcccgcagctggacccccagcccgcggccctggcc
ggcgcagagctggtgcgtcaggccctggcggagctgcccgcccctgcggcgggcgagacc
ttcgacttctgggaggcggaggtcacggcgctgatcgaggagcacgaggccgcgcaggcc
ccggtcgtggaggtggcgctgcccggtgagctcaccgccacggacctggtgaatctgcgg
gcggatccgctgcagttcgcgcgtcggcagcgacgtcccgtgccgttccggccgaaccag
tacgccaagcgcggcacggccttccacgagtggctcgaggaccgtttcggggccacggcg
ctgctcgacgaggatcagctgccgggcctggacgaacagcccgtcgacgccgatgacctg
gtgaagctcaaggagtccttcctggccagcgagtgggcggagcggaccccggagttcgtg
gagcagcccttcgaggtgaccatcggcgggtcggtggtgcgcggacgcatggacgccgtg
ttccgtgacccgcaggacccggagggctggctgatcgtcgactggaagaccggccggccg
ccgagcggtccggaccggaaggccgcgatcatccagctggcggtgtaccgggaggcgtgg
cgccggatcatcggcgaggacgtccccgtgcgtgccgcattccactacgtgggctggggc
gagaccctcgagccgcacgatctgccaggtcatgcggaactggagcagatgttggcggag
gcggtcgtcgacaaggaggcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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