KEGG   Corynebacterium halotolerans: A605_09085Help
Entry
A605_09085        CDS       T02472                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
chn  Corynebacterium halotolerans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:chn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    A605_09085
Enzymes [BR:chn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     A605_09085
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     A605_09085
DNA repair and recombination proteins [BR:chn03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A605_09085
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
complement(1980309..1981145)
Genome map
AA seq 278 aa AA seqDB search
MPELPEVEVVRRGLADHVLGATFHGVEVLHPRANRGQEVPLAVLLDGARIDAVRRRGKYL
WLDLGEDSALFVHLGMSGQMLVGEPGTCTSKHLRIRAALTASDARELELAFVDQRTFGRW
LHTDTVDGIPLPVAHIARDPLEPDFDPVAVARRIRTKKSPVKSVLLDQTVVSGIGNIYAD
ESLWAARVKPTRRAASLRQGDVVTLLAAAREVMERALESGGTSFDALYVNVNGASGYFSR
SLNVYGREGQPCPRCGTPIRRVAFANRSTHYCPTCQVL
NT seq 837 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagctccccgaagtcgaggtcgtccgccgcggcctcgccgaccacgtcctgggt
gcgaccttccacggcgtggaggtgctgcacccgcgcgccaaccgcgggcaggaggtaccc
ctggcggtgctgctcgacggcgcgcggatcgacgccgtgcgccggcgcgggaagtacctg
tggctggacctgggggaggactccgcgctgttcgtccacctcggcatgagcgggcagatg
ctcgtcggcgaacccggcacctgcacctcgaaacacctgcgcatccgcgccgcgctgacc
gcctcggacgcccgggaactggagctggcgttcgtcgaccagcgcaccttcggccggtgg
ctgcacaccgacacggtcgacggcatcccgctgcccgtggcgcacatcgcccgcgatccg
ctggagcccgacttcgacccggtggccgtggcgcggcggatccgcacgaagaagtcaccg
gtgaagtccgtgctgctggaccagacggtggtctccggcatcggcaacatctacgccgat
gaatccctctgggcggcacgcgtcaagcccacacgccgggccgccagtctgcgccagggc
gacgtcgtcacgctgctggccgccgcgagggaggtcatggagcgcgcgctcgagtccggc
ggaaccagctttgacgcgctctacgtcaacgtcaacggggcgtcgggctacttctcccgt
tcgctcaacgtctacggccgggaggggcagccctgcccgcgctgcggcaccccgatccgg
cgcgtggccttcgccaaccggtccacgcactactgcccgacctgccaggtcctctga

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