KEGG   Cryptosporidium hominis: Chro.10372
Entry
Chro.10372        CDS       T00210                                 
Name
(RefSeq) transcription/repair factor TFIIH subunit Tfb3
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
cho  Cryptosporidium hominis
Pathway
cho03022  Basal transcription factors
cho03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cho00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Chro.10372
  09124 Replication and repair
   03420 Nucleotide excision repair
    Chro.10372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cho03021]
    Chro.10372
   03400 DNA repair and recombination proteins [BR:cho03400]
    Chro.10372
Transcription machinery [BR:cho03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Chro.10372
DNA repair and recombination proteins [BR:cho03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Chro.10372
SSDB
Motif
Pfam: MAT1 zf-RING_2 zf-C3HC4 zf-RING_5 zf-C3HC4_5 zf-C3HC4_2 zf-RING_UBOX zf-RING_4 FYVE zf-C3HC4_3 IES5 Prok-RING_4 Prim_Zn_Ribbon
Other DBs
NCBI-GeneID: 3412098
NCBI-ProteinID: XP_665451
Position
1
AA seq 296 aa
MNEDIWKDGQKQYSCPLCMTSTYYKNDIKMYYGDPCGHKFCSECSTKANNNKKSTSILRG
SNQICPVCHGFVKYIADFEYGETDFLKFESQARKQVYTILNETRKDFKDTPCYDNYLEKR
EDLIYKLIYGNDTEKKSTQDFLNQYSKENQVAILDRKTREETLLRNDILEIVQKEGTFYE
QLNQLSQNATIDHLQIVHPLQNEYPEFFQNFNKNSNNQNNSNNQNIALGSNIPNPIDKNI
TCKEYLHQNAKKSNVSTYSSIESKQRAGGFTENIVWSLCKNELFFGFYACHHDSNP
NT seq 891 nt   +upstreamnt  +downstreamnt
atgaatgaggatatttggaaagatggtcaaaaacaatattcttgcccattatgcatgaca
agtacatattataagaatgatatcaaaatgtactatggtgatccatgtggacataaattt
tgttcagaatgttcaacaaaagcaaataataataaaaaatcaacaagtatactaagagga
agtaatcaaatatgtccggtatgtcatggttttgttaaatatattgcagactttgaatat
ggcgaaacagattttttaaaatttgaaagtcaagcaagaaagcaggtatatacaatatta
aatgaaacaagaaaagattttaaagatacgccttgttatgataattatcttgagaaacgt
gaagatttaatatataaattaatttatggaaatgatacagaaaagaaatcaacacaagat
ttcttaaatcaatattcaaaagaaaatcaagttgctatattagatagaaaaactagagaa
gaaactcttttaagaaatgatattcttgaaattgtacaaaaagaaggtactttttatgag
caacttaatcaactttctcaaaatgctacaattgatcatcttcaaattgtacacccactt
caaaatgagtatcctgaattctttcaaaattttaataaaaattctaacaatcaaaacaat
tctaataatcaaaatattgctcttggtagtaatattcctaatcctatcgacaagaatatt
acatgcaaggaatatctacatcaaaatgctaagaaatcaaatgtttcaacatattcatcc
attgaatctaaacaacgtgcagggggatttactgaaaacattgtatggagtttgtgtaaa
aatgagctcttttttgggttttatgcttgtcatcatgattctaatccgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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