KEGG T05085: NIES4102

Chondrocystis sp. NIES-4102: NIES4102_03280

Entry

NIES4102_03280    CDS       T05085

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

chon Chondrocystis sp. NIES-4102

Brite

KEGG Orthology (KO) [BR:chon00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chon03032]
    NIES4102_03280 (gyrB)
   03400 DNA repair and recombination proteins [BR:chon03400]
    NIES4102_03280 (gyrB)
Enzymes [BR:chon01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NIES4102_03280 (gyrB)
DNA replication proteins [BR:chon03032]
Prokaryotic type
  DNA Topoisomerases
   NIES4102_03280 (gyrB)
DNA repair and recombination proteins [BR:chon03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NIES4102_03280 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 TOPRIM_C

Other DBs

NCBI-ProteinID:

BAZ43328

UniProt:

A0A1Z4RLK4

Position

351950..353878

AA seq 642 aa
MTSTYDADQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVYEVVDNSIDEALAGYCTHIEV
DINADGSITVTDDGRGIPTGIHSKTGKSALETVMTVLHAGGKFGGGGYKVSGGLHGVGIS
VVNALSKLVEVTVWRDKKIHIQRYERGKPQGELGVTPNKKDPKRTGTSVHFIPDEVIFTE
TTVFEYEVLAKRLKELAYLNAGIKITFSDRREAEVHQDIYYYEGGIKEYVKYMTLEKEPL
HEDIIYVSKEKNGVTVEVALQWCIDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNN
FARKRNKIKDNEANLGGENVREGLTGVVSVKVPDPEFEGQTKTKLGNTEVRGIVDSVVGE
VLNDYLEFNLSVGDAIIEKAIQSFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDP
QESEIFLVEGDSAGGSAKQGRDRRFQAILPLRGKIINIEKTDDAKIYKNNEIQSMITALG
LGIKGDEFDPSQLRYHRIVIMTDADVDGAHIRTLLLTFFYRYQRELVDQGYVYIACPPLY
KLERGRNHQYCYSDRELQQCIEQLPANANYTIQRFKGLGEMMPQQLWDTTMNPETRAMKR
VEIDDAAEADRIFTVLMGDRVGPRREFIETHAPKLNLDDLDI

NT seq 1929 nt +upstreamnt +downstreamnt
atgactagcacgtacgatgcagatcagattcaggttcttgagggtttagaagcggtaaga
aaacgcccagggatgtatattggttcaacagggccaaaaggactgcatcatttagtatat
gaggtggtggataactctatagatgaggcacttgctggttattgcacccatattgaagtt
gatattaatgcggatggttctattactgtaactgacgatgggcgtggtattcctacaggt
attcattccaaaacaggaaaatctgctttagagacggttatgaccgtactacacgctggg
ggaaaatttggcggtggtggttataaagtttctggtggtttacatggagtaggtatatca
gttgttaacgccctttcaaaattagttgaggtgacagtttggcgagacaaaaaaattcac
atccaacgatatgaaagaggaaagcctcaaggggaattaggggtaacacccaataaaaaa
gatcccaaacgtacaggaacttcggtacattttattcctgatgaagtaatttttacagaa
acgacggtttttgaatatgaggtattagccaaacgtttaaaagagttggcttatctcaat
gcgggtattaaaattacctttagcgatcgccgtgaagcagaggtacatcaagatatttat
tattatgagggtgggataaaagaatacgtcaaatacatgacgttggaaaaagaacccctg
cacgaagatattatctatgttagtaaggaaaaaaacggcgttacagtagaagttgctttg
caatggtgtattgatgcttatagtgataacctactaggttttgctaataatattcgtacc
attgacggggggactcatttagaaggtttaaaaaccgtccttactcggacgatgaataac
tttgcccgtaagcgcaataaaattaaagataatgaagccaatttagggggagaaaacgtc
cgcgagggcttaactggggtagtttcagttaaagtaccagatcccgaatttgaaggacaa
accaagactaaattaggtaacaccgaagtaagaggaatagttgattctgtagttggggaa
gttttaaatgattatttagaatttaatctcagcgttggcgatgcaatcattgaaaaagca
attcaatcttttaaagcagcagaagcagcccgtcatgctagggagttagtccgtcgcaaa
tcagttttagagtcttctcccctaccaggaaaactagctgactgtagttctcgcgatcct
caagagtcggagatatttctcgtagaaggcgatagtgcaggtggttcagcaaaacaagga
cgagatcgaagatttcaagcaattttgccccttagaggtaagattatcaacatcgaaaag
actgatgacgcaaaaatttataagaataatgagattcagtcgatgattactgctttgggt
ttaggtattaagggggatgaatttgatccttcccaattaagatatcaccgcatagtaatt
atgactgacgctgatgttgatggggcgcacatcagaacccttttattgactttcttctat
cgttatcaaagggagttagtagatcaaggttatgtttatattgcttgtccgcctttgtat
aaattagaacggggacgtaatcatcaatattgttatagcgatcgcgaattacaacagtgt
attgagcaacttcctgcgaatgccaattatacaattcaacggtttaaaggtttgggtgaa
atgatgcctcaacaactttgggataccactatgaatcctgaaacacgggcaatgaaacgg
gtggaaatcgatgatgcagccgaagctgatcgaatttttaccgtcttaatgggcgatcgc
gttggccccaggcgcgaatttatcgaaacccatgcacctaagttaaatctagatgatctg
gatatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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