KEGG   Chryseobacterium sp. T16E-39: CEY12_03120
Entry
CEY12_03120       CDS       T04952                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
chry  Chryseobacterium sp. T16E-39
Pathway
chry03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chry00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CEY12_03120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chry03019]
    CEY12_03120
Messenger RNA biogenesis [BR:chry03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CEY12_03120
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 AAA_19 AAA_22 CMS1 RNase_P-MRP_p29 UvrD-helicase SWI2_SNF2 HEM4
Other DBs
NCBI-ProteinID: ASK29157
UniProt: A0A220S6U2
Position
742451..743593
AA seq 380 aa
MSFESLGLSHNIIRSVNKLGYLKPFPIQEQAIPVILQGKDLMGIAQTGSGKTACFVMPIL
EKLQNQEVKKDRNIQVLILVPTRELAIQIDEVFRTFTENLKRDIRTMAVYGGVSINPQMK
GMFGVEVLIATPGRLLDLIDHKALSISGIKHLVIDEADKMFQLGFGEEMNKLFALMPVMK
QTTLFSATLDDKVSEMKKRLSINPVFIEIKKEEVEIDHIEQLAYHVSPEDKGPFLRYLIK
EKKVEKALIFVSSTKSADNLVQKLKKNKIKAVAIHSQKSQGARRNNLEEFKVNGAQILVA
TDLIGRGIHIDSLPCVINYELPRSPLDYIHRIGRTGRANEKGTAISILTDDELQHFRVIQ
KKMGKKVTLQRTEGIDLHGY
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgtcatttgagtctttaggattatcacacaatattattcgttccgttaataaattgggc
tatttgaagccgtttcccattcaggagcaggcaatccctgttattcttcagggaaaggat
ctgatgggaattgcgcaaacaggttcggggaaaacagcttgttttgtgatgcctatttta
gaaaaacttcaaaatcaggaagttaaaaaagaccgtaatattcaggttttaatattggtt
cctacgcgtgagttagcgattcagattgatgaagttttcaggacttttacagagaattta
aaacgagatatccgtaccatggcagtttatggtggagtttctatcaatccacagatgaaa
ggaatgtttggcgtggaagttcttatagcgacaccaggacgtttattagatttaattgat
cacaaggcattaagtatttcaggaatcaaacatttagtgattgatgaggccgataaaatg
tttcagttgggttttggggaagaaatgaataagctttttgccctcatgcctgtaatgaaa
cagacaaccttgttttcagcgactttagatgataaagtttccgagatgaagaaacgtctg
tcaattaatcctgtatttattgaaatcaaaaaagaggaagttgaaattgatcatattgaa
caattagcctatcatgtttctccggaagataaaggaccttttttacgttacttaattaaa
gaaaaaaaagttgaaaaagctttgatctttgtttcctccacgaaatccgcagataattta
gttcagaaacttaagaaaaataagattaaggcggtcgctattcatagtcagaaatcacaa
ggtgcccgtagaaataatctggaggaatttaaagttaatggcgcccagatccttgtggct
acagatttaattggtcgtggtattcatatcgattctttaccttgtgtgatcaattacgaa
ttgccacgttctccattggattatattcatcgtataggaagaacgggtcgtgccaatgaa
aaaggaactgcgattagcattcttacagatgatgaattgcaacattttagagtcattcaa
aaaaagatgggaaaaaaagtgaccttacaaagaacagagggaatagatcttcatggatat
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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