KEGG   Cytophaga hutchinsonii: CHU_1549
Entry
CHU_1549          CDS       T00385                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
chu  Cytophaga hutchinsonii
Pathway
chu03030  DNA replication
chu03430  Mismatch repair
chu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHU_1549 (dnaN)
   03430 Mismatch repair
    CHU_1549 (dnaN)
   03440 Homologous recombination
    CHU_1549 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chu03032]
    CHU_1549 (dnaN)
   03400 DNA repair and recombination proteins [BR:chu03400]
    CHU_1549 (dnaN)
Enzymes [BR:chu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CHU_1549 (dnaN)
DNA replication proteins [BR:chu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CHU_1549 (dnaN)
DNA repair and recombination proteins [BR:chu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CHU_1549 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: ABG58820
UniProt: A0A6N4SR58
Position
1805812..1806936
AA seq 374 aa
MKFVVSSNALLKQLTAINGVITTNPVVPILENFLFEIGDGMLVVYASDLQTSMITEIAVE
AKAKGSIAVPAKILLDTLKNLPEQPVTFTIDPETYSIEISSDNGRYKLSGENATDFPKVP
GVKNGYSVDISTEILNRAISSTIFAASNDELKPAMTGVYVSLTESNATFVATDGHRLIRY
RRTDIVSEMANTLIIPKKALNLLKASLPSENTNVKIEYNASNAFFSFNNIKMICRLIDER
FPDYENAIPVDNPNVLTITRTDMMNSLKRISIYANKTTHQVRLKLAGSELQISAEDLDFS
NEANERLACEFEGQDMEIGFNAKFLVEMLSNLDSPQISMHFSAPNRAGIITPADKDEHED
VLMLVMPVMLNSYA
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaaatttgtcgtttcttcaaatgctttacttaagcaactaactgccataaatggtgtt
attacaaccaatccggtagtgcctattctggaaaattttctatttgaaattggagatgga
atgctggttgtttatgcttctgatcttcaaacgtcaatgattactgaaatcgctgttgag
gcgaaagcaaagggtagtattgcagtaccggctaagattttgctggatacattgaaaaac
ttacctgaacagccggtaacatttacaattgatcctgaaacatatagcatcgagatcagc
tcagataacggtcgttataaactttcaggtgaaaacgctacagatttccctaaagtgcct
ggtgttaaaaatggctacagcgtagatatctcaactgaaatattaaaccgtgctatttct
tctaccatctttgctgccagcaacgatgaattgaaaccggcaatgacaggtgtatacgtt
tcattaacggaatctaatgcaacatttgttgctacagacggtcaccgtttgatccgttac
agacgtacggatatcgtgtctgaaatggccaatacattgattattcctaaaaaggcattg
aacttattaaaagcttctttaccttcagaaaataccaatgttaaaattgaatacaatgca
tccaatgcattcttcagctttaacaatattaaaatgatttgtcgtttgatcgatgagcgt
ttcccggattacgaaaacgcaattccggtagacaatccgaatgttcttacaattacaaga
acggatatgatgaattcattaaaacgtatttcgatctatgcgaacaaaacaacgcatcag
gttcgtttgaaattagcaggaagtgaattgcagatttctgcagaagatttggatttctcc
aacgaagcaaatgagcgtttagcgtgtgagtttgaaggtcaggatatggaaatcggtttc
aacgcgaagttcctggttgaaatgttaagcaacctggatagcccgcagatctccatgcat
ttctctgcaccgaacagagccggtattatcactccggccgataaagatgaacacgaagat
gtattgatgcttgttatgccggtaatgttaaacagttacgcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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