KEGG   Capra hircus (goat): 102168690
Entry
102168690         CDS       T02910                                 
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
chx  Capra hircus (goat)
Pathway
chx03018  RNA degradation
chx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102168690 (LSM8)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102168690 (LSM8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chx03019]
    102168690 (LSM8)
   03041 Spliceosome [BR:chx03041]
    102168690 (LSM8)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102168690 (LSM8)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     102168690 (LSM8)
Spliceosome [BR:chx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    102168690 (LSM8)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 102168690
NCBI-ProteinID: XP_005679410
Position
4:complement(37445643..37454257)
AA seq 96 aa
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq 291 nt   +upstreamnt  +downstreamnt
atgacgtccgccttggagaactacatcaaccgaactgttgctgtcattacttctgatggg
agaatgattgtgggaacactgaaaggttttgaccagaccattaatttgatactggatgaa
agccatgaacgagtgttcagctcttcacagggagtagaacaagtggtactagggttatac
atcgtaagaggtgacaatgttgcagtcattggagaaattgacgaagagacagattctgca
cttgatttggggaatattcgagcagaacctttgaactctgtagcacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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