KEGG   Capra hircus (goat): 102171776
Entry
102171776         CDS       T02910                                 
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
  KO
K12026  tripartite motif-containing protein 56 [EC:2.3.2.27]
Organism
chx  Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:chx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:chx04121]
    102171776 (TRIM56)
Enzymes [BR:chx01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102171776 (TRIM56)
Ubiquitin system [BR:chx04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102171776 (TRIM56)
SSDB
Motif
Pfam: zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-C3HC4_4
Other DBs
NCBI-GeneID: 102171776
NCBI-ProteinID: XP_017896374
EnsemblRapid: ENSCHIG00000016250
Position
25:complement(36508447..36512010)
AA seq 754 aa
MVSQGSSPSLLEALSSDFLACKICLEQLQVPKTLPCLHTYCQDCLAQLAEGGRLRCPECR
ESVPLPPAGVVAFKTNFFVNGLLDLVKARAGGDLRAGKPACALCPLMGGASAGGPATARC
LDCADDLCQACADGHRCTRQTHSHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDNNLAELEATRLAEKEA
LARLREQASKVVTQVEEAAERVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELEGREQ
VAREAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWVPGAAPCQLPQLELHPGLLD
KNCHLLRLSFEEQQPQDSKKDGAQSQGGDATQPQSRDGVQTPDQDRAQTPQEDEAQPLKA
ERAETPEEDGAKTPKEGRAQTPQEDGGTQARGGGRSNKKRKFKGRLKSISREPSPAPGPN
LEGSGLLPRPIFFCTFPTRMPGDKRAPRITGLCPFGSREILVADEQNRALKRFSLNGDYR
GAVPVPEGCSPCSVAALQDAVAFSAAARLYLINHNGEVQWRRALSLCQASHAVAAMPSGD
RVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSPQGHFVGSDWQQNSLVVC
DGLGQVVGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPKGSLLGDFLTAYHG
LEKPRVTTMVDGRYLVVSLSNGTIHVFRVRPLDS
NT seq 2265 nt   +upstreamnt  +downstreamnt
atggtttcccagggctcctcaccatccctcctggaggccctgagcagcgacttcctggcc
tgtaaaatctgcctggagcaactgcaggtgcccaaaacgctgccctgcctgcacacctac
tgccaggactgcctggcacagctggccgagggaggccgcctccgatgccctgagtgccgc
gagtctgtgcccctgccgcccgcgggcgtggtcgccttcaagaccaacttctttgtcaac
ggactcctggatttggtgaaggcccgggccggtggcgacctgcgggcagggaagccggcc
tgtgccctgtgccccttgatggggggcgccagtgccggggggccagccactgcccgctgc
ctggactgcgctgatgacctgtgccaggcctgtgccgacggacaccggtgcacccgacag
acccacagccatcgggtggtggacctggtgggctatagggccgggtggtatgatgaggag
gcccgggagcgccaggcagcccagtgtccccagcacccaggggaggccctgcgcttcctg
tgccagccgtgctcccagctgttgtgccgagagtgtcgcctggacccgcacctggaccac
ccctgcctgcccctggctgaggctgtgcgcgcccggaggcccggcctcgaggagctgctg
gccggcgtggacaacaacctggccgagctggaggccacccggctggccgaaaaggaagcc
ttggcccggctgcgggagcaggcgtccaaggtggtcacgcaggtggaggaggcggccgag
cgagttctcagggccctcctggcccagaagcaggaggtgctcgggcaactgcgggcccac
gtggaggctgccgaggaggctgctcgggagcgcctgggggagctggagggccgggagcaa
gtggccagggaggcggccgcctttgcccgtcgggtgcttagcctggggcgcgaggctgag
atcctctcgctggagggggcgatcgcccagcggctccggcagctgcagggctgtccctgg
gtgcctggggccgctccctgccagctgccccagctggaactgcatcccgggctcctggac
aagaactgccacctgctgaggctctcctttgaggagcagcagccacaggacagcaagaag
gatggagcccaaagccagggaggtgatgcaacccagccccagagcagggatggagttcag
acccccgaccaggacagagcgcagacaccccaagaggacgaagcccagcccctcaaggcg
gagagagccgagactcccgaggaagatggagccaagaccccgaaagagggcagagcccag
acaccccaggaagatggaggaacccaggctcgggggggcggaaggtccaacaagaagagg
aagttcaaaggcaggctcaagtccatctcccgggagcccagccctgcccccgggccaaac
ctggagggctccggcctcctccccaggcccatctttttctgcaccttccccacccggatg
cctggggacaagcgcgccccccggattactgggctctgtccctttgggtcccgggagatc
ctggtggcggatgagcagaacagggccctaaagcgcttctctctgaatggcgactacagg
ggcgcggtgcctgtgcccgagggctgctccccatgcagtgtggccgccctgcaggacgcc
gtggcattctcagcggccgcgcggctctatctcatcaaccacaacggcgaggtgcagtgg
cgccgggcgctgagcctctgccaggccagccacgctgtggctgccatgccgagcggggac
cgggtggcggtcagcgtgtccggacacgtggaggtgtacaacatggaaggcagcttggcc
acacggttcatccctgggggcaaggccaaccggggcctgcgggcactggtgttcctgacc
accagtccccagggccattttgtagggtccgattggcagcagaatagcttggtggtctgt
gatgggctgggtcaggtggttggggaataccggggacccggtctgcatggctgccagccg
ggctccgtgtccgtggataagaaaggctacatctttctgacccttcgtgaggtcaacaag
gtagtgatccttgatccgaagggctcgctgcttggcgacttcctgacggcctatcacggc
ctggaaaagccccgggtgaccaccatggtggacggcaggtacctggtcgtgtccctcagt
aacgggaccatccatgtctttcgggtccgccctcttgacagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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