KEGG   Capra hircus (goat): 102176835
Entry
102176835         CDS       T02910                                 
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
  KO
K04842  voltage-gated sodium channel type X alpha
Organism
chx  Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:chx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:chx04040]
    102176835 (SCN10A)
Ion channels [BR:chx04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   102176835 (SCN10A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel CcmD_alt GPHH Na_trans_cytopl Lustrin_cystein
Other DBs
NCBI-GeneID: 102176835
NCBI-ProteinID: XP_017893964
EnsemblRapid: ENSCHIG00000009678
Position
22:complement(11967702..12055185)
AA seq 1982 aa
MEFPFGSLETTNFRRFTPESLVEIEKRIAAKQESKKVKEKFRRQKDQKEKPRPQLDLKAC
NQLPKFYGTLPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITITILVNCVGMTRTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYAGEVTDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTVFCLSVFALVGLQLFKGNLKNRCVKNCTAVNETANYSSHEKQEW
NYCQRDPDYYTNKEGTSDPLLCGNGSDAGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
MFRLMTQDSWERLYQQTLRASGKIYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATI
DEIEAKEKKFQEALEMLRTEQEVLAALGVDTASLQSHNGSPLASKTASERKHRMKSRVSE
GSTDDNKSLRSESYNQHRMSFLGLTAGRRRASHGSVFHFQAPGRDISFPDGVTDDGVFPG
DHESRRGSLLMLRGAGQQGPLPRSPLPQTLNRGSGCGEDGAPKMTTGELAPGVIEVSASD
AGQKTFLTADYLNEPFRVQRAMSVVSIMTSVLEELEESKQRCPPCLTSLAQKYLIWDCCP
TWVKLKTLLFAIVMDPFAELTITLCIVVNTVFMAVEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKIIALDPYYYFQKKWNIFDCIIVTVSLIELGAARKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYCHKREKISAPNEDWPR
WHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSADNLTPPEDDGEVNNLQVALARIQVFGQHTKRALCSFLSRPCLLPQPKAEPQLVV
KLPLSTSIAKNHIAADTALGSPGRLPALRSPRDNHSDFITDPNIWVSVPIAEGESDLDDL
EENGEEDAQSTRQEVIPQRQEQLQQVGKYEDHLPPRSPGSGISSEDLTPYLGEKWKDEAP
AQGPAEGADDTSSSEGSTVDCLDPEEILRKIPELADDLDEPDDCFTEGCVHHCPCCRVNS
SRFPWATGWQVRKACFRIVEHSWFESFIVFMILLSSGALAFEDFYLDRKPTVKALLEYTD
RVFTFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKALQYSDMAPIKALR
TLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQKC
INKTNEGFLLVPWSTVNNMSDCERQNHTGSLFWVNVKVNFDNVAMGYLALLQVATFKGWM
DIMYAAVDSRDVNFQPKWEDNVYMYFYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVLICLNM
ITMMVETDEQSEKKTKVLNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFVVVVLS
IGSLVFSAIVTSLGSLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYSIFGMASFATVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPI
LNTGPPYCDPNLTINNSTRGDCGSPIVGIIFFTTYIIISFLIVVNMYIAVILENFNVATE
ESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNVLIQMDL
PLVPGDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQ
EDISATVIQKAYRSYMRHRSRTIASPAGVPRAEEGAASLPDEGFAALIANENCTLPDKSE
TASTTSFPPSYDSVTRGLSDQVNLSTSSSMHNEGEAVSKEAAGPSCGPSSKGTSSSDVSA
AL
NT seq 5949 nt   +upstreamnt  +downstreamnt
atggaattcccctttgggtccctggaaactaccaacttccgtcgattcaccccggagtcc
ctggtggagattgaaaaaagaattgctgctaagcaagagtcaaagaaagtcaaagagaag
ttcaggaggcagaaggaccagaaagagaagcctcggccccagctagacttgaaagcctgc
aaccagttgcccaagttctacggtacgctcccggctgagctgattggggagccgctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagcgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtccgtccactcatatcctttgtggttcagtttatttataacc
atcactattttggtcaattgtgtgggcatgacccgaacagaacttccagagagaatggag
tatgtcttcactgtcatttatacctttgaagccttgataaagatattggcaagaggattt
tgtctaaatgagttcacttacctgagagatccttggaactggctggattttagtgtcatc
actctggcctacgctggtgaagtgacagacctccgagggatctcaggcctgcggacgttc
agagtccttcgagctttaaaaaccgtgtctgtgatcccggggctgaaggtcatcgtgggg
gccctgatccactcggtgaagaagctggctgacgtgaccattctcactgtcttctgcctg
agtgtctttgccctggtgggcctgcagctcttcaagggcaacctcaagaacagatgtgtc
aagaactgcacagctgtcaatgagacagccaattactcctctcacgaaaaacaggagtgg
aattactgccaacgggacccagattactataccaacaaggaaggcacctctgacccctta
ctctgtggcaatggatctgatgcaggccactgccctgaaggttatttctgccttaagaca
tctgacaacccagattttaactataccagctttgattccttcgcttgggcttttctctca
atgtttcgcctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggct
tctgggaaaatctatatggtgtttttcgtgcttgttatcttcctggggtctttctacctg
gtcaatttgatcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccatt
gatgaaattgaagccaaggagaagaagttccaggaggcccttgagatgctccggacagag
caggaggtgcttgcagcactgggggttgacacagcctctctccagtctcacaatggatcc
cccttggcctccaaaactgccagtgaaagaaaacacagaatgaagtcaagggtgtccgag
ggctccacagacgacaacaagtcactccggtctgagtcttacaaccagcaccgaatgtct
ttcctaggcctcaccgctgggagacgccgggctagccacggcagtgtgttccacttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gaccatgaaagccgtcgtggctctctgctgatgcttaggggtgcaggccagcaaggcccc
ctccctaggagtccactgcctcaaaccctcaaccgcggctcagggtgtggagaagatgga
gctcccaaaatgaccactggagagcttgcccctggagtcatcgaagtctcggcatctgat
gcaggacagaagactttcctaacagcagattacttgaatgaacctttccgagtccaaagg
gcaatgagtgttgtcagtatcatgacctctgtcctcgaggaactcgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcagaagtatcttatctgggattgctgcccc
acatgggtgaagctcaagacacttctcttcgcaattgtgatggacccctttgcggagctc
accatcaccctgtgcatcgtggtgaacaccgtcttcatggccgtggagcactatggcatg
agccccgccttcgaagccatgctccagattggcaacatcgtgtttaccgtgttttttact
gctgaaatggtcttcaaaatcatagccttggacccctactattacttccagaagaagtgg
aacatatttgactgcatcattgtcaccgtgagcctgatagagctgggcgcagcccggaag
gggagcctgacggtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtcc
tggcccaccttaaacacgctcatcaaaatcatcggcaactcggtcggggccctggggaac
ctcaccatcatcctggccatcattgtcttcgtctttgctctggtgggcaagcagctcctg
ggggaaaactactgccacaagcgggaaaaaatttcagcccccaacgaagactggccccgc
tggcacatgcatgacttcttccactccttcctcattgtcttccggatcctctgtggagag
tggattgagaacatgtgggcctgcatggaagttggccagaagtctatctgcctcatcctt
ttcttgacagtgatggtgctgggcaacctggtggtgcttaacctgttcatcgccctgctg
ctgaactccttcagtgccgacaacctcacaccacccgaggatgacggcgaggtgaacaac
ctgcaggtggccttagcgaggatccaggtgttcggccagcacactaagagggccctttgc
agtttcctcagtcggccctgcttactcccccagcccaaggcagagccccagttggtggtg
aaactcccactttccacctccatagccaagaaccacattgctgctgacacagccctgggg
agccccggacggctcccggcactcagaagccccagggacaatcacagtgacttcatcacc
gatcctaacatatgggtctctgtgcccattgctgagggcgaatccgacctggatgacttg
gaggagaatggtgaggaggatgctcagagcaccaggcaggaagtgatcccccaaaggcag
gagcagctgcagcaagttgggaagtatgaggatcacctgccacccaggagcccagggtct
ggaatatcctctgaagacctgactccatacctaggtgagaagtggaaagacgaggctcct
gctcagggccctgcagagggagcggacgacacaagctcctcggaaggcagcactgtggac
tgcctggaccccgaggagatcctgaggaagatccctgagctggcagacgacctcgatgag
ccagatgactgcttcacggaaggctgtgttcaccactgtccctgttgcagagtgaacagc
tccaggtttccctgggccacaggctggcaggtacgcaaggcctgctttcgcatcgtggag
cacagctggtttgaaagtttcattgtcttcatgatcctgctcagcagtggagcgctggcc
tttgaagatttttaccttgaccggaagcccacggtgaaggccttgctggagtacactgac
agggtgttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctacggcttt
aagaattacttcaccaatgcctggtgctggctggacttcctgatcgtgaacatctcactg
acaagcctcatagcgaaggcgctgcagtattctgatatggcgcccatcaaagcccttcgg
accctccgcgccctgcggccactgcgggctctgtctcgatttgaaggcatgcgggtggtg
gtagacgccctggtgggcgccatcccatccatcatgaacgtcctcctcgtctgcctcatc
ttctggctcatcttcagcatcatgggcgtgaacctcttcgcggggaagtttcagaaatgc
atcaacaagaccaatgaaggctttcttcttgtgccttggtctactgtgaataacatgtct
gactgtgagcgtcaaaaccacactggaagcttattttgggtcaatgtgaaggtcaacttt
gataatgttgcaatgggctacctcgcgcttctgcaggtggcaacctttaaaggctggatg
gacatcatgtatgcggctgtcgattcccgggatgtgaactttcagcccaagtgggaggac
aacgtgtacatgtacttttactttgtcatcttcatcatttttggaggcttcttcacgctc
aatctctttgttggcgtcatcattgacaacttcaaccaacagaaaaaaaagttaggaggc
caggacatcttcatgacagaggagcagaagaagtactacaatgccatgaagaagctgggc
tccaagaagccccagaagcccatcccacggcccctgaataagtaccagggtttcgtcttt
gacatcgtgaccaggcagacttttgacatcgttatcatggtcctcatctgcctcaacatg
atcaccatgatggtggagactgatgaacagagtgaaaaaaagacaaaagtcctgaacaaa
atcaaccagttctttgtggctgtcttcacgggagagtgtgtcatgaagatgtttgccttg
aggcattactacttcaccaacggctggaatgtgttcgacttcgtcgtcgtggtcctctcc
attgggagcctggtgttctctgcaattgttacgtcacttggaagtctcttctccccgacg
ctcttccgcgtcatccgcctggcccgcattggccgcatcctcaggctgatccgcggggcc
aagggcatccgcacgctgctctttgccctcatgatgtccctgcccgccctcttcaacatc
gggctgctgctcttcctcgtcatgttcatctactccatcttcggcatggccagcttcgcc
accgtcaagtgggaggccggcatcgacgacatgttcaacttccagacctttgccaacagc
atgctgtgcctcttccagatcaccacgtcagcaggctgggacgggctcctcagccccatc
ctcaacacggggcccccctactgcgaccccaacttgaccatcaacaacagcacaagaggg
gactgcgggagtcccatcgtgggcatcatcttcttcaccacctacatcatcatctccttc
ctcatcgtggtcaacatgtacatcgcagtgattctggagaacttcaatgtggccacggag
gagagcacagagcccctgagtgaggacgactttgacatgttctacgagacgtgggagaag
tttgacccagaggccactcagttcatcaccttctctgccctctcagactttgcagacacc
ctgtctggccccctgagaatccccaaacccaatcggaatgtattaatccagatggacctg
cccttggtccctggagataagatccactgtttggacatcctgtttgccttcaccaagaat
gtccttggagaatccggggagctggattccctgaaggcaaatatggaggagaaatttatg
gcaactaatctttcaaaagcatcctatgaaccaatagcaaccaccctccgatggaagcaa
gaagacatctcagccactgtcatccaaaaggcctatcggagctacatgcggcaccgctcc
aggacgatcgccagccctgcgggggtgcccagggctgaggagggggcagcatcactcccc
gatgaaggctttgctgcgctcatagccaatgaaaactgtacgctcccagacaaatctgaa
acggcttccaccacatctttcccaccatcctacgacagcgtcactagaggccttagtgat
caagtcaacttgagcacatccagctcaatgcacaatgaaggggaggctgtcagtaaagaa
gctgctgggccctcatgtggaccctccagcaagggcacgtccagttctgatgtgtccgct
gctctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system